Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2424 ATGCAGGAGTCCCTCCTGAGATCTTGCTCTAGGAAAGCAGACTCACCAAACAGATCATCACCTGGGGAACTATCTATCCATGATCTTGCTCTTGCCCTTGCCCCATCCCTGTTCCAATCTAGTTCTCATCATGTCACCAATGAAGCCAAGACTTCTATGCACCTCATAGCCAACTTGGCCTTCAAGAAAGGAAAGTTTATCCATCGCTCTCGCTCTGCACCATCTTTATTATTCACTGACATGGGATTAGATTTTCAAGAACCATCTGAACCACACAAGTCATCAACTTCAATAGTGAGGCTATCTTTTCTTGGTGTTTTCTTGTATGTGGCAATTGGGGTGACAGTGTACATGACTAGTGGGAGTTTCAGGGGCACTACCACTTTCAGGCCTGTAGATGCTGTGTACTTTACAATGGTAACTCTCTGCACTATTGGATATGGAGATATTGTTCCTGACTCCACGTTTACCAAGATCTTTACATGTGGTTTCATTTTGGTGGGTTTTGGATTTCTTGGTTTTCTGCTCAATGGATTGGTTGCATACATTTGTGATACACAAGAGGCATTCTTGTTGAGCATGATGGATGAGAATAGATATAAGAAAATTCTCAGGACTTATATGGTTGATGAAGAGAAAGGAAGAATGAGAATAAGAACCAAAGTTTGTCTGGCTTTGGCTGTTGTGATTGGCTGCATTGCTATAGGAACAGTCACAGTGCACTTAGTTGAGGACCTGAATTGGGATGACAGTATTTATCTCTCCATTACTTCGGTTACAACGGTTGGTTATGGGGATTTTTCTCTCAGAACAGTAACCGGAAGATGCTTTGCAATTATATGGCTTTTGGTAAGCACACTGGCAGTTGCCAGGGCCTTTATATACCTTACTGAATATAGTATTCACAAGAGAAATCGTAAGATGGCACAATGGGTTCTTCAGAAGAAGATAACCTTATCAGATTTAGCAGCTGCAGACCTTGATAATGATGGATCAATCAGCAAGTCTGACTTTGTCATATACAAGCTTAAGCAAATGGGGAAGATTACTGAGATAGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGAACATGGCATGTATGGCAAGATTACTCTTGCTGACCTCATGGATACTGTCTAA 1146 0.4119 MQESLLRSCSRKADSPNRSSPGELSIHDLALALAPSLFQSSSHHVTNEAKTSMHLIANLAFKKGKFIHRSRSAPSLLFTDMGLDFQEPSEPHKSSTSIVRLSFLGVFLYVAIGVTVYMTSGSFRGTTTFRPVDAVYFTMVTLCTIGYGDIVPDSTFTKIFTCGFILVGFGFLGFLLNGLVAYICDTQEAFLLSMMDENRYKKILRTYMVDEEKGRMRIRTKVCLALAVVIGCIAIGTVTVHLVEDLNWDDSIYLSITSVTTVGYGDFSLRTVTGRCFAIIWLLVSTLAVARAFIYLTEYSIHKRNRKMAQWVLQKKITLSDLAAADLDNDGSISKSDFVIYKLKQMGKITEIDILQISKQFDSLEHGMYGKITLADLMDTV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2424 381 PANTHER OS01G0696100 PROTEIN 47 376 - -
Gso2g2424 381 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Gso2g2424 381 Gene3D - 89 184 - -
Gso2g2424 381 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 47 376 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso2g2424 381 SUPERFAMILY Voltage-gated potassium channels 95 183 - -
Gso2g2424 381 SUPERFAMILY Voltage-gated potassium channels 195 316 - -
Gso2g2424 381 MobiDBLite consensus disorder prediction 1 22 - -
Gso2g2424 381 Gene3D - 185 325 - -
Gso2g2424 381 PRINTS Two pore domain K+ channel signature 140 168 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso2g2424 381 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso2g2424 381 Pfam Ion channel 228 293 IPR013099 -
Gso2g2424 381 Pfam Ion channel 107 182 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2424 Gso-Chr2 48804555 48806775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2424 63 379 Ion Channels AT4G18160 48.910 3.39e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2424 K05389 - gmx:100789639 721.85