Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2421 ATGTTTGGTGAAATGGATAGAAAACAAGAACAAGACAAGGGAAACTCAAACATGTCTGGCACGGATGTAGCTCTAATATCTCCCAAAGTCCCAAAAGCAGTTTCACCACTTTCTTCTGCAGCAGAAGGGGACACCTTAAGGCGACCACGTGGCCGGCCGGCCGGCTCCAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTCTAACTTTGCAAGGAGAAAGCAACGTGGCCTTTACATATTCAATGGAACAGGCTGTGTAACGAATGTAACGTTGTGCCAGCCAGGCTCATCTGGTGCCATTGTGACACTTCACGGTCGATTCGAGATTCTTTCACTGCTGGGGTCAATCCTTCCCCCACCAGCCCCTCCAGGGATCACAGGCCTCACAATTTACTTGGCAGGTGCTCAAGGGCAAGTTGTGGGGGGTGCTGTGGTTGGTGCTTTGATTGCTTCAGGCCCTCTTGTAATCATGGCTGCATCATTCATGCATGCTACTTTTGATCGCCTTCCATTGGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCACCATCTTGATATTTCTGACTTGTATGCAATGCCACAGAACCTGCTCATGAATGGTACAATGCCCCCAGAGATATACTCTTGGGCACCAGGGCAGAACTTGTCAAAAACCTGA 759 0.4822 MFGEMDRKQEQDKGNSNMSGTDVALISPKVPKAVSPLSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLSNFARRKQRGLYIFNGTGCVTNVTLCQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGTMPPEIYSWAPGQNLSKT* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2421 252 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 203 - -
Gso2g2421 252 ProSiteProfiles PPC domain profile profile. 71 209 IPR005175 -
Gso2g2421 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 251 IPR014476 GO:0003680
Gso2g2421 252 MobiDBLite consensus disorder prediction 1 65 - -
Gso2g2421 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 186 IPR005175 -
Gso2g2421 252 Gene3D - 73 217 - -
Gso2g2421 252 CDD DUF296 77 157 IPR005175 -
Gso2g2421 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 5 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2421 Gso-Chr2 48793957 48796144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2421 5 249 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 66.667 7.21e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2421 - - gmx:100788581 453.366