Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2409 ATGAGTGTTAAGGTTGGAGAAGGAGAATTCATTGTGAGTGTGAGCAAGGAGGAGGTGGTGGTACCAGAGATTCCAATGCATGAGCACTGGCTGCCACTATCTAACCTTGATCTACTCATTCCCCCAATGGATGTTAGTGTATTCTTCTGCTACAAAAAACCTTTGCCTGAAAAATATTATTGCTTCGGAACCATGGTGGGGTCACTGAAAAATGCCCTAGCACAGGCACTGGTTTACTATTACCCTTTTGCAGGTGAAATGGTGGCCAACACCATGGGTGAGCCTGAGCTCTTTTGCAGTAATCGTGGGGCGGATTTTGTTGAAGCTGTGGCAGAGGTTGAACTCCAGTGCCTCAACTTGTACAACCCTGATGACACTGTTCAAGGGAAGTTTGTACCAAGGAAGAAGCATGGTTTGCTTGCTGTTCAGGCAACTGAGCTTAAGTGTGGGAGTTTAGTAGTGGCATGCACTTTCGACCATCGCATAGCAGATGCCTACTCTGCAAACATGTTCCTGGTGTCATGGGCCGAGATAGCCCAGTCCAACAAGCCCATAATATCAATCCAGCCCTCTTTTGCTCGGTCCCTTTTCATCCCACGAAATCCACCTTCCTTCCATTCTTCACTTCACGACTTGTACGTCTCCATCTCGGCGTCACCTCGACCGTCAGATCCAAAACCCGAGTTCCAATCTGAGCCACTCATTAACCGCATATACTACGTCACAGGTGAAAACCTCAACCTTATGCAGAAACTGGCAAGCTCAAACGGTGTGAAGCGCACAAAGCTCGAGTCTTTCTCTGCTTTCTTGTGGAAGATGGTTGCTGAAGCTGCAGCGGCTAAGGTTAAGGGTAAGAAAAACCTCGTTGCGAAGATGGGTGTTGTGGTTGATGGAAGGAAGAGGTTAAGTAACGGTGACAAGAACAAAGAAGCAATCATGGGTTCGTATTTTGGTAACGTAGTTTCTATTCCCTATGGTGGGAAACCGGTGGAGGAGCTTATGGAAAAGCCATTGAGTTGGGTGGCGGAGAAAGTTCATGAGTTTTTGGAGATTGGTCTGACAGAAGAGCATTTTTTGGGACTTGTTGATTGGGTTGAGGTACATCGACCAGCTCCTGGTTTGTCTAGGATTTATTGTGGGCATGGCAAGGAAGAAGGACCAAGTTTTGTGGTTTCTTCTGGTCAAAGGTTTCCGGAGTCAAAGGTTGATTTTGGGTGGGGGAAGCCCGTGTTTGCATCGTACCATTTTCCTTGGGGTGGAGATTCTGGCTATGTCATGCCAATGCCTTCTTCTACTGGGAATGGTGATTGGTTGGTCTACATGCACCTTCTCGAGGCTCATTTGAATTTCATGGAGGTTAGGGCTCCTCAAATTTTTTGGCCATTCTCTCGGGATTATCATTTCAATCGTCATTGA 1416 0.4689 MSVKVGEGEFIVSVSKEEVVVPEIPMHEHWLPLSNLDLLIPPMDVSVFFCYKKPLPEKYYCFGTMVGSLKNALAQALVYYYPFAGEMVANTMGEPELFCSNRGADFVEAVAEVELQCLNLYNPDDTVQGKFVPRKKHGLLAVQATELKCGSLVVACTFDHRIADAYSANMFLVSWAEIAQSNKPIISIQPSFARSLFIPRNPPSFHSSLHDLYVSISASPRPSDPKPEFQSEPLINRIYYVTGENLNLMQKLASSNGVKRTKLESFSAFLWKMVAEAAAAKVKGKKNLVAKMGVVVDGRKRLSNGDKNKEAIMGSYFGNVVSIPYGGKPVEELMEKPLSWVAEKVHEFLEIGLTEEHFLGLVDWVEVHRPAPGLSRIYCGHGKEEGPSFVVSSGQRFPESKVDFGWGKPVFASYHFPWGGDSGYVMPMPSSTGNGDWLVYMHLLEAHLNFMEVRAPQIFWPFSRDYHFNRH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2409 471 Pfam Transferase family 12 452 - -
Gso2g2409 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 464 - -
Gso2g2409 471 Gene3D - 10 213 IPR023213 -
Gso2g2409 471 Gene3D - 216 453 IPR023213 -
Gso2g2409 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2409 Gso-Chr2 48671844 48677265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2409 12 452 Monolignol Biosynthesis Gene Families AT5G48930 25.714 3.22e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2409 - - gmx:100817652 947.577