Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2391 ATGTCCTTAACTTCTAAGCTAGTTATTCCAAAAATGGGAACTCCAACTCTTGGCCTTGTACTTGTACTCCTTCTTTCGTTCTTAACATGGCCTGCTTCTGTTTCTTCTTCTCTTCCCATGTCTTTGAGAAGGCAAGCCTCTATCTTGGTTTCTCTCAAACAAGATTTTGAGGCAAACACTGATTCTTTGAGAACCTGGAACATGTCTAACTACATGTCCCTTTGCAGTGGTACTTGGGAGGGTATTCAGTGTGACGAAAAGAACAGGTCAGTGGTGTCATTGGACATATCAAACTTCAACCTTTCTGGCACACTTTCACCTTCCATCACAGGACTAAGGAGCCTTGTGAGTGTTTCACTTGCTGGCAATGGCTTCTCAGGAGTGTTCCCTAGTGATATTCACAAGCTAGGAGGGTTGAGATTCCTCAACATATCCGGCAACGCGTTCAGCGGAGACATGAGATGGGAATTTTCTCAGTTGAATGAGCTTGAAGTGCTTGATGCTTATGACAATGAGTTCAATTGCTCCCTCCCTCTTGGTGTAACTCAGCTCCACAAGCTTAATAGCTTGAATTTTGGCGGGAACTATTTCTTTGGTGAAATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCAGGAAATGATTTGAGGGGTCTCATACCACCTGAGCTTGGGAACCTCACTAACCTGACACAGCTTTTCTTGGGATACTACAATCAGTTTGATGGTGGTATCCCTCCTGAGTTTGGTGAGTTGGTTAGTTTAACTCATCTTGACCTTGCAAACTGTGGCTTGACAGGTCCAATTCCCCCTGAGTTGGGAAACCTCATCAAATTGGACACTCTCTTTTTGCAAACTAACCAGCTCAGTGGCTCAATTCCTCCACAATTAGGCAACATGAGTGGCTTGAAGTGTCTTGATTTGTCAAACAATGAGCTCACAGGAGACATCCCTAATGAGTTCTCAGGCCTTCATGAGCTCACACTCTTGAACTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCTGAGCTGCCTAACTTGGAAGTGCTGAAGCTTTGGCAGAACAACTTCACAGGTGCCATTCCCTCGAGGCTTGGCCAGAATGGTAAACTGGCTGAGCTTGACCTCTCAACAAACAAGCTCACTGGATTGGTGCCTAAATCTCTATGCCTTGGGAGGAGGCTCAGGATTTTGATCCTGCTCAACAATTTTCTCTTTGGATCTTTGCCTGCTGATCTTGGACAATGCTACACACTCCAAAGAGTTCGTTTGGGACAGAACTACTTGACAGGATCAATTCCAAATGGTTTTCTTTACTTGCCTGAGTTGGCCCTTTTGGAATTGCAGAACAATTACCTCAGTGGTTGGCTTCCACAAGAAACAGGCACTGCACCCTCTAAACTCGGACAGCTGAATCTATCAAACAATCGCCTATCTGGCTCCCTACCAACTTCCATTAGAAACTTTCCCAACTTGCAAATTCTGCTGCTTCATGGAAATAGACTCTCAGGAGAAATCCCTCCAGATATAGGGAAGCTGAAAAATATACTCAAGTTGGATATGAGTGTCAACAATTTTTCTGGTAGTATTCCTCCTGAGATAGGTAACTGTTTGTTGCTCACCTATTTAGATTTGAGCCAAAACCAACTAGCAGGCCCTATCCCAGTTCAGCTTTCTCAAATTCACATAATGAACTATCTTAATGTCTCATGGAACCACCTAAGCCAAAGTCTTCCCGAGGAACTCGGGGCCATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCTGAGGAGGGGCAATTCTCAGTGTTTAACTCTACATCCTTTGTGGGAAATCCTCAGCTCTGTGGATATGAGCTGAATCCATGTAAACATTCTTCAAATGCAGTATTGGAGTCCCAAGACAGTGGCAGTGCAAGACCTGGAGTTCCTGGGAAGTATAAGCTTCTCTTTGCAGTAGCACTGTTGGCTTGCTCATTGGCATTTGCAACATTGGCCTTTATCAAGAGCAGAAAGCAAAGAAGGCACTCCAATTCATGGAAGCTGACAACATTTCAGAATCTGGAATTTGGAAGTGAAGACATCATAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGGGGTGGAGCTGGGGTTGTATACCATGGAACAATGCCAAATGGAGAGCAAGTAGCTGTGAAGAAGCTCTTGGGAATCAACAAAGGGTGTTCTCATGATAATGGCCTCTCAGCAGAAATAAGGACACTGGGAAGAATCAGGCACAGGTACATTGTGAGGCTGCTGGCATTTTGTTCCAATAGAGAGACCAATTTGCTTGTTTATGAGTACATGCCTAATGGAAGCTTAGGCGAAATCTTGCATGGGAAAAGAGGAGAGTTTCTCAAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGGCTTTGCTATTTGCACCATGATTGTTCCCCTCTGATAATCCACAGAGATGTGAAGTCAAACAACATATTGTTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATACTGGGACATCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGTTACATTGCTCCAGAATATGCATACACGTTGAAAGTTGATGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTGCTGCTAGAACTACTAACAGGGAGAAGGCCAGTGGGGAATTTTGGGGAAGAAGGTCTAGACATTGTTCAATGGACCAAGTTGCAAACAAATTGGAGCAATGACAAGGTGGTGAAGATTCTTGATGAGAGGCTATGTCACATTCCCTTAGATGAAGCAAAGCAGGTATACTTTGTGGCCATGCTATGTGTTCAGGAACAAAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAGAAACCAAACACATTCCAAAAGCAGTGA 3000 0.44 MSLTSKLVIPKMGTPTLGLVLVLLLSFLTWPASVSSSLPMSLRRQASILVSLKQDFEANTDSLRTWNMSNYMSLCSGTWEGIQCDEKNRSVVSLDISNFNLSGTLSPSITGLRSLVSVSLAGNGFSGVFPSDIHKLGGLRFLNISGNAFSGDMRWEFSQLNELEVLDAYDNEFNCSLPLGVTQLHKLNSLNFGGNYFFGEIPPSYGDMVQLNFLSLAGNDLRGLIPPELGNLTNLTQLFLGYYNQFDGGIPPEFGELVSLTHLDLANCGLTGPIPPELGNLIKLDTLFLQTNQLSGSIPPQLGNMSGLKCLDLSNNELTGDIPNEFSGLHELTLLNLFINRLHGEIPPFIAELPNLEVLKLWQNNFTGAIPSRLGQNGKLAELDLSTNKLTGLVPKSLCLGRRLRILILLNNFLFGSLPADLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELALLELQNNYLSGWLPQETGTAPSKLGQLNLSNNRLSGSLPTSIRNFPNLQILLLHGNRLSGEIPPDIGKLKNILKLDMSVNNFSGSIPPEIGNCLLLTYLDLSQNQLAGPIPVQLSQIHIMNYLNVSWNHLSQSLPEELGAMKGLTSADFSHNDFSGSIPEEGQFSVFNSTSFVGNPQLCGYELNPCKHSSNAVLESQDSGSARPGVPGKYKLLFAVALLACSLAFATLAFIKSRKQRRHSNSWKLTTFQNLEFGSEDIIGCIKESNVIGRGGAGVVYHGTMPNGEQVAVKKLLGINKGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGEILHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGNFGEEGLDIVQWTKLQTNWSNDKVVKILDERLCHIPLDEAKQVYFVAMLCVQEQSVERPTMREVVEMLAQAKKPNTFQKQ* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2391 999 Gene3D Phosphorylase Kinase; domain 1 681 792 - -
Gso2g2391 999 Gene3D Transferase(Phosphotransferase) domain 1 793 999 - -
Gso2g2391 999 ProSiteProfiles Protein kinase domain profile. 715 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2391 999 SUPERFAMILY Protein kinase-like (PK-like) 709 987 IPR011009 -
Gso2g2391 999 SMART LRR_typ_2 208 232 IPR003591 -
Gso2g2391 999 SMART LRR_typ_2 353 377 IPR003591 -
Gso2g2391 999 SMART LRR_typ_2 498 522 IPR003591 -
Gso2g2391 999 SMART LRR_typ_2 257 281 IPR003591 -
Gso2g2391 999 SMART LRR_typ_2 305 328 IPR003591 -
Gso2g2391 999 SMART LRR_typ_2 449 473 IPR003591 -
Gso2g2391 999 SMART LRR_typ_2 378 400 IPR003591 -
Gso2g2391 999 Gene3D Ribonuclease Inhibitor 345 646 IPR032675 -
Gso2g2391 999 Pfam Leucine rich repeat N-terminal domain 45 85 IPR013210 -
Gso2g2391 999 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Gso2g2391 999 Pfam Leucine Rich Repeat 259 281 IPR001611 GO:0005515
Gso2g2391 999 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 20 996 - -
Gso2g2391 999 PANTHER UNNAMED PRODUCT 20 996 - -
Gso2g2391 999 Gene3D Ribonuclease Inhibitor 44 155 IPR032675 -
Gso2g2391 999 Gene3D Ribonuclease Inhibitor 156 243 IPR032675 -
Gso2g2391 999 Gene3D Ribonuclease Inhibitor 244 344 IPR032675 -
Gso2g2391 999 SUPERFAMILY L domain-like 378 639 - -
Gso2g2391 999 SUPERFAMILY L domain-like 63 395 - -
Gso2g2391 999 Pfam Protein tyrosine and serine/threonine kinase 717 987 IPR001245 GO:0004672|GO:0006468
Gso2g2391 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Gso2g2391 999 SMART serkin_6 715 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2391 Gso-Chr2 48493378 48498092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2391 33 992 Receptor kinase-like Gene Family AT5G65700 57.988 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso2g2391 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2391 - - gmx:100777902 1952.18