Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2382 ATGGAAGAATCAAGTGAATTGCAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAAGAAAGCTGAAAACACCGGCGCAGCTTAAAGCCTTGGAGGATTTTTATAATGAGCACAAATACCCCACGGAGGAAATGAAATTAGTACTTGCTGAGGAGTTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGATGAAAGATGAAGCCGTTGCTAATGGGAGACAAGATCGTTCAAGTGGTGTCATCCAAGATCGTGGCAGTGGACTTGGGCAAGATTCATGCGGAAGCAGTAAGCATGCTGATCACAGGTATCTGGATCCGAAGGAGGTTGAGAGCCATGGCCTCTACAATCACGAATTGTCAGTTGCAGATATGACCCACAGACGTAGGAACCATTATCCTGAAAATGTTAGTGGGGTGGATGACACATCATCTGAGAGCAGCTCATTTTTGCAAGAAAGGTTTTCTCAAGGTCAGGATCCGTATGATATGGAGCCTTCTAGACATCTTACACCTAATGGAGCTCTTCCACCCCTAAATCCCAAAGGTGCAGTTAAGATGGGGCACAAACCATCAGGATATTTGAAAGTGAAGGGCGAGATAGAGCATGCTGCTATAACTGCTGTTAGAAAGCAATTAGGAAGGCATTATCTGGAAGATGGTCCACTACTTGGTATAGAATTCGATCCACTTCCTCCAGGGGCATTTGAATGCCAAACTGCAGATACAGCTAATGAACCGTACTCTGTTGCAAATCCTCTGCTTTCGAATTCTCCAGAAATCTTTGCTGCAAAAAGACAACCCAGTCTTAGCTCTAGATATGATTCATATTATACTAAATTTCGTTCCCAAGATTCGCATATGGAAGGAGCTGACTTTGGTTCCTTGCATGAATCTGATTTCCAGGATAAACAAGATAAGAAAGCATGTCAGAACATAAAACAAAGGCAATCTTTATACGGTTATACCAATAATTTTCCTGGAAGGAACACTTTCCCAGATTTGTATGAAGACTCTACTGGAGAAGCATCTGCTTATAATAGCAATAAGAGTCATAGAATGAGCACTAAACATGGTGTTGAGGGGATGCGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAAGCTTACAGTTAAGCAGAAAACCTTGATGCTGCATGGTTATGATAACATCAATCCAAAGAATATACAAAGGAGTGAACATGTAAAATCTAAACCTTCTAGTTCAATCCATAATTCCCGTGTTCCTATGGATACTGAAGAACGGGGGTTATCTGCTAGGATGGCAAAGGAAGAGATGTTTAAGGGGAACAGGAAAGCAAAAAATACATACTGCGATGTAGAGGGAGCAGGGATGCTTTCAAATGAAATCATGGTTGCAAAACGAGCTAAAGTTGACATGCTTCAACAATACAATGTGAAAAAATCACCTGTTGCTGAGATGGAACTAAAGAAAATTCAGAGATCTGTTGCAGAGATGCCTTCTAGCTTTAGCGAGGATGAAACTGCTGACACCAGTTCCTCACTGGATTATTAA 1581 0.4067 MEESSELQSEENKVSNEKNKKRKLKTPAQLKALEDFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHELSVADMTHRRRNHYPENVSGVDDTSSESSSFLQERFSQGQDPYDMEPSRHLTPNGALPPLNPKGAVKMGHKPSGYLKVKGEIEHAAITAVRKQLGRHYLEDGPLLGIEFDPLPPGAFECQTADTANEPYSVANPLLSNSPEIFAAKRQPSLSSRYDSYYTKFRSQDSHMEGADFGSLHESDFQDKQDKKACQNIKQRQSLYGYTNNFPGRNTFPDLYEDSTGEASAYNSNKSHRMSTKHGVEGMRSDSASNHSDHYEEKLTVKQKTLMLHGYDNINPKNIQRSEHVKSKPSSSIHNSRVPMDTEERGLSARMAKEEMFKGNRKAKNTYCDVEGAGMLSNEIMVAKRAKVDMLQQYNVKKSPVAEMELKKIQRSVAEMPSSFSEDETADTSSSLDY* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2382 526 MobiDBLite consensus disorder prediction 7 30 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 1 30 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 149 168 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 504 526 - -
Gso2g2382 526 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 525 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 343 384 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 414 438 - -
Gso2g2382 526 Gene3D - 8 92 - -
Gso2g2382 526 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Gso2g2382 526 MobiDBLite consensus disorder prediction 144 178 - -
Gso2g2382 526 CDD homeodomain 20 75 IPR001356 GO:0003677
Gso2g2382 526 SMART HOX_1 18 80 IPR001356 GO:0003677
Gso2g2382 526 MobiDBLite consensus disorder prediction 82 113 - -
Gso2g2382 526 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Gso2g2382 526 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 525 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 506 526 - -
Gso2g2382 526 MobiDBLite consensus disorder prediction 88 106 - -
Gso2g2382 526 SUPERFAMILY Homeodomain-like 18 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2382 Gso-Chr2 48409359 48414992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2382 3 525 Homeobox Transcription Factor Family AT4G03250 40.074 2.06e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gso2g2382 Homeodomain 2.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2382 - - gmx:100805913 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0294 14 2588116 2596231 Gso2g2382 2 48409359 48414992 GST
Gso8g2509 8 42285357 42290866 Gso2g2382 2 48409359 48414992 PCT
Gso2g2382 2 48409359 48414992 Gso8g2509 8 42285357 42290866 PCT