Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2378 ATGGCAAACAATTTTTGTGCACCTTCCCTTTCCCCACCTCCGCCATCACCTCTATCATCAACTTTGTCTTCACCTATCTTCGTTATCCCTTCTGAGTCAGATGTCCCTCCTCCTGATGTGGTTGCAATTGCTAAGAGGCTTAAAAGGAAGCCATCTGGCTCAGAGAATAAGCCCAAGCCAGTCATAGAGGAATTTCCTAAACCCATGTTCCTAATGGTCCCCGCTGGCATAGACATTATCAATGCCATCATTACCTTTGCCCGCAACCAACATGCTAGTATCTTGGTGCACCATGCTTCAGGCACCATCTCTCAAGTTAACCTTTGCAACCCTGTATATCCTTTTGATGATTTGTCCTTCCAGGGAAACATGTACATGTTTTCTTTCTCTGGATTTTACACCAAAAGCCTTTCACCTTTACCTCCAAAGAACATTCCATTTTCCTTCTTCAACATTCGATTATCGAAGGGAACAACACCCCAACACTTGGGTGGCCTTATTAGAGGCAAGCTTATTGCTGCGGAACCTGTGCATGTCATGGCTTCACTCCTCAAGGAGCATGAGTACCAAGAGATTGGGTATCCCATGATCACAAATCCAAATGTTTAA 609 0.445 MANNFCAPSLSPPPPSPLSSTLSSPIFVIPSESDVPPPDVVAIAKRLKRKPSGSENKPKPVIEEFPKPMFLMVPAGIDIINAIITFARNQHASILVHHASGTISQVNLCNPVYPFDDLSFQGNMYMFSFSGFYTKSLSPLPPKNIPFSFFNIRLSKGTTPQHLGGLIRGKLIAAEPVHVMASLLKEHEYQEIGYPMITNPNV* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2378 202 Pfam Plants and Prokaryotes Conserved (PCC) domain 67 183 IPR005175 -
Gso2g2378 202 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g2378 202 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 191 - -
Gso2g2378 202 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 27 192 - -
Gso2g2378 202 Gene3D - 67 198 - -
Gso2g2378 202 ProSiteProfiles PPC domain profile profile. 63 202 IPR005175 -
Gso2g2378 202 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 192 IPR014476 GO:0003680
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2378 41 192 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.515 7.08e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2378 - - gmx:102666204 380.563