Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2371 ATGGGCAATTGTTGCTCAGGTGGCACCAATGACACTGAGGACAAAAGAGAAACCAACCAACCAACCAGTGACAACGGAGGCGGAGGCGCGACTGCAACCGCAACCGCAACCGCAGCCGCCACCACCCCGCCACCATCATCTAAGGCCAAGCAGTCGAAGCCGGCTGCGATCGGGCCGGTGCTCGGAAGGGCGATGGAGGACGTGAAAAGCACTTATAGCATGGGGAAAGAGCTAGGGAGAGGGCAGTTTGGTGTGACACATTTGTGCACACACAAGAGCACAGGGAAGCAATATGCATGCAAGACCATAGCGAAGAGAAAATTGGTTAACAAGGAGGATATAGAGGATGTTAAGAGGGAGGTGCAAATCATGCATCATCTCTCAGGGCAAGCTAACATTGTGGAACTTGTTAATGTGTATGAGGACAAGCAATCTGTTCATTTGGTGATGGAGTTGTGTGCAGGCGGCGAACTCTTTGATCGCATCATTGCAAAGGGACATTACACTGAACGTGCTGCGGCTTCATTGTTGAGAACCATTGTGCAGATTGTTCACACTTGCCATTCCATGGGAGTCATTCATAGAGATCTTAAGCCTGAGAATTTCCTTCTCTTGAACAAGGATGAGAATGCACCCCTCAAGGCCACTGATTTCGGTCTCTCCGTTTTTTACAAGCAAGGAGAGATGTTTAAGGACATTGTTGGCAGTGCATATTACATTGCACCCGAGGTCTTAAAAAGAAAATACGGACCGGAAGTTGACATTTGGAGTATTGGTGTCATGTTATACATTCTTCTATGCGGTGTTCCTCCCTTTTGGGCAGAATCCGAAAATGGGATATTCAATGCAATCCTACGAGGCCATGTTGACTTTACAAGCGATCCATGGCCATCCATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTGCATTCGGATCCCAGGCAGAGGATGACGGCCTACGAAGTTCTGAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAACGCAGTACTGAATAGGCTCAAACAGTTCAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTCATTGCGGGCTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAGGGGGATGGATACTGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGGCTTGCAAAACAAGGGACTAAACTAACGGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGAACCATAGATTACGATGAATTCATTACAGCAACAATGCACATGAACCGAATGAACAAAGAAGATCATCTTTATACTGCTTTCCAATACTTTGATAAAGATAACAGCGGGTACATTACCATTGAAGAACTAGAGCAGGCACTCGTTGAGTTTAACATGCATGATGGCAGGGACATGAAGGAAATCATTTCAGAAGTTGACTCAGATAATGATGGCCGGATTAACTATGATGAGTTTGCTGCAATGATGAACAAAGGAACACTAGAAGTTGGTACCAAGAAGAGGCGTGATTCAACCGTATATTAG 1584 0.4564 MGNCCSGGTNDTEDKRETNQPTSDNGGGGATATATATAAATTPPPSSKAKQSKPAAIGPVLGRAMEDVKSTYSMGKELGRGQFGVTHLCTHKSTGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQANIVELVNVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFTSDPWPSISPAAKDLVRKMLHSDPRQRMTAYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNEFKKVALRVIAGCLSEEEIMGLKQMFRGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALVEFNMHDGRDMKEIISEVDSDNDGRINYDEFAAMMNKGTLEVGTKKRRDSTVY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2371 527 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Gso2g2371 527 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Gso2g2371 527 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Gso2g2371 527 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 17 518 - -
Gso2g2371 527 MobiDBLite consensus disorder prediction 21 49 - -
Gso2g2371 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Gso2g2371 527 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Gso2g2371 527 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Gso2g2371 527 Gene3D Transferase(Phosphotransferase) domain 1 158 337 - -
Gso2g2371 527 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2371 527 Gene3D - 338 513 - -
Gso2g2371 527 MobiDBLite consensus disorder prediction 1 60 - -
Gso2g2371 527 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Gso2g2371 527 CDD STKc_CAMK 72 329 - -
Gso2g2371 527 ProSiteProfiles EF-hand calcium-binding domain profile. 484 515 IPR002048 GO:0005509
Gso2g2371 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 17 518 - -
Gso2g2371 527 Pfam EF-hand domain pair 448 509 IPR002048 GO:0005509
Gso2g2371 527 Pfam EF-hand domain pair 378 438 IPR002048 GO:0005509
Gso2g2371 527 SUPERFAMILY Protein kinase-like (PK-like) 70 336 IPR011009 -
Gso2g2371 527 ProSitePatterns Protein kinases ATP-binding region signature. 78 105 IPR017441 GO:0005524
Gso2g2371 527 SUPERFAMILY EF-hand 370 510 IPR011992 -
Gso2g2371 527 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Gso2g2371 527 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2371 527 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2371 527 SMART efh_1 449 477 IPR002048 GO:0005509
Gso2g2371 527 SMART efh_1 377 405 IPR002048 GO:0005509
Gso2g2371 527 SMART efh_1 484 512 IPR002048 GO:0005509
Gso2g2371 527 SMART efh_1 413 441 IPR002048 GO:0005509
Gso2g2371 527 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2371 Gso-Chr2 48261892 48269103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2371 1 523 EF-hand Containing Proteins AT5G12180 79.810 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso2g2371 Pkinase 9.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2371 K13412 - gmx:100819061 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0305 14 2748299 2752703 Gso2g2371 2 48261892 48269103 GST