Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2354 ATGAGGAAGAAGCTAGATACTCGTTTCCCTGCGGCTAGGATTAAGAAAATTATGCAAGCTGACGAGGATGTAGGGAAGATTGCAATGGCCGTGCCTCTTCTAGTTTCTAAAGCACTAGAGCTATTTCTGCAAGATTTGTGTGATCGAACATATGATATAACTTTGAGGAGAGGGGCAAAGACTATGAATGCTTTTCATTTAAAACAGTGTGTGCAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGTTGCAACTGGTGATGACCATGCTGTCACTAAGAGGAGGAAAGTTGCTGGAGATGATGATAATGACAGCGATGAGGAGCTCAAGAGAAATAAGAAGCCAGAGCCTGGACATAGCAGTGGCAGAGGAAGGGGTAGAGGCAGAGGTAGGGGTCTTGGCGGTGGAATTAGAACTGTAGATCAAGAGATGAGTTCACATGCCAAGTGTGAAGATGATTCTGATGTCTTGAAGCAGAATGACAACCACACTCAGAGTAATGAAAGCATGGAAAATGTGCTGGAACCTGAAGAAGTTAAGCAGAGTTTTCCAGTAAGCGAACTGGCCGAAGTGTCTGTTCGAAATTTTGACTTAAATTTGGACCCAGATGAGAATATGGATTCTTTAGACACACCAACTTCTGTCCCAACTAGTTCATCTGCAAAATCAGTGTCAGAAGAGAAGCATGAGGAATACCCTGGATGGTCCTTGTCTGAGATGGAAAAAATGATCATTGATCCCATTCAACTAGCTAACTTAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATGTAG 840 0.4179 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLRRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDHAVTKRRKVAGDDDNDSDEELKRNKKPEPGHSSGRGRGRGRGRGLGGGIRTVDQEMSSHAKCEDDSDVLKQNDNHTQSNESMENVLEPEEVKQSFPVSELAEVSVRNFDLNLDPDENMDSLDTPTSVPTSSSAKSVSEEKHEEYPGWSLSEMEKMIIDPIQLANLNGRIDEDEEDYDEEM* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2354 279 MobiDBLite consensus disorder prediction 99 134 - -
Gso2g2354 279 MobiDBLite consensus disorder prediction 217 233 - -
Gso2g2354 279 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Gso2g2354 279 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 278 - -
Gso2g2354 279 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Gso2g2354 279 MobiDBLite consensus disorder prediction 91 246 - -
Gso2g2354 279 PANTHER HISTONE SUPERFAMILY PROTEIN 1 278 - -
Gso2g2354 279 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Gso2g2354 279 MobiDBLite consensus disorder prediction 155 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2354 Gso-Chr2 48127440 48131430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2354 1 268 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.793 1.82e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gso2g2354 CBFD_NFYB_HMF 4.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2354 K21752 - gmx:100814800 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0331 14 2989239 2993144 Gso2g2354 2 48127440 48131430 GST