Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2345 ATGGCAATTGCAGCCCCAGGGCAACTGAACGTGAATGAATCACCCATTTGGGGATCCAGAAGTGTTGATTGCTTCGAGAAATTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTCATCAAGCTGAAAGAAATTGTGACTTCTCAAGGTCCTGAGAAAGATGAACAGGGGAAGCCAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTAACTGGTCTTGCTGACCGACCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCACTATTGTCATGTAAATCAAGTACTTCATCGAGATATCAAAGGCTCAAATCTTCTTATAGACAATGAAGGAAATCTTAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAATGACCAAAATGCAAATCTTACAAATCGTGTCATTACGTTATGGTACAGACCACCTGAGTTGCTGCTAGGGACAACAAAGTATGGACCAGCTGTGGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCAAGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAACAAAATATATGAGCTGTGTGGAGCACCAAATGAAGTCAATTGGCCTGGGGTTTCCAAGATACCTTATTATAATAAATTTATGCCAACAAGGCCGATGAAAAGACGTTTGAGGGATGTCTTCAGGCATTTTGATCATCATGCTCTGGAATTGTTGGAGAAGATGTTGACACTTGATCCTTCTCAGAGAATTACTGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGCGATCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGCCAACAACAACGGCAAAATGAAGAAATGGCTAAGCGTCAGAAAATGCAGCACCCACAGCCACACACTCGTCTTCCCCCCATTCAGCAGCCTGGGCAACATGCCCAAATGCGGTCAGGACCAAACCAACCAATTCATGGCTCTCAACCCCAAGTTTCTGCAGGACCTACCCATCATTATGGGAAGCCCCGAGGTCCATCTGGTGGGCCAGGAAGATATCCTCCCAATGGGAACCCAGGTGGAGGATACAGTCACCCAAATCGAGCAGGTCAAGGTGGTTCTGGTTATGGCAGTGGACCTTATCCTCCTCAAGGGAGGGGGGCGCCTTATGGGTCCAATAGTATGCCTGGTGGTGGTCCTCGTGGCAGTGGTGCCAGCGGCTATGTTGGAGCTCCAAATTATCCCCAACAAGGTGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGCTCGAACATGATGGGTGGAAACCGCAATCAACAACAGTATGGTTGGCAGCAGTAA 1551 0.4533 MAIAAPGQLNVNESPIWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSQGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLQGKPIFPGKDEPEQLNKIYELCGAPNEVNWPGVSKIPYYNKFMPTRPMKRRLRDVFRHFDHHALELLEKMLTLDPSQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQPHTRLPPIQQPGQHAQMRSGPNQPIHGSQPQVSAGPTHHYGKPRGPSGGPGRYPPNGNPGGGYSHPNRAGQGGSGYGSGPYPPQGRGAPYGSNSMPGGGPRGSGASGYVGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQQYGWQQ* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2345 516 PANTHER CELL DIVISION PROTEIN KINASE 5 454 - -
Gso2g2345 516 MobiDBLite consensus disorder prediction 501 516 - -
Gso2g2345 516 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2345 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Gso2g2345 516 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Gso2g2345 516 MobiDBLite consensus disorder prediction 377 405 - -
Gso2g2345 516 MobiDBLite consensus disorder prediction 335 516 - -
Gso2g2345 516 CDD STKc_CDK9_like 25 324 - -
Gso2g2345 516 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 454 - -
Gso2g2345 516 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2345 516 MobiDBLite consensus disorder prediction 337 366 - -
Gso2g2345 516 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2345 516 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Gso2g2345 516 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Gso2g2345 516 SUPERFAMILY Protein kinase-like (PK-like) 18 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2345 Gso-Chr2 48051564 48058236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2345 1 516 Core Cell Cycle Gene Families AT5G10270 76.099 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gso2g2345 Pkinase 2.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2345 K08819 - gmx:100795971 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0339 14 3051083 3057140 Gso2g2345 2 48051564 48058236 GST