Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2338 ATGGAGATTTTAAGTTTTAAAAAAATAGTGATGATGATGATAACTATGATGTTGGTAAACATGGCGAAATCAGAGCTTCACTACGTTGGAGGCAACAAGACAACTTGGGCAGCCAATGTTAACTTCACAGAATGGTCAAGTAGTGAGCACTTCCATTTGATGGATTGGATTTACTTTGGATATGAAAGGCACGAGTACAGTGTACTAGAGGTGAACAAGACTAGTTATGAGAACTGCATAGAGAAAGGATTTATTCAAAACGTATCAAGGGGTGCAGGAAGAGATGTGTTTCAACTAACAGAGTTCAAGACTTACTACTTCTTAAGTGGAGGAGGCCATTGTTGGGATGGGGTGAAGGTTGCTATAACTGTTACTGAGGGTGTTGCTTCACCAACTCCTGCACCTTCACCAAAAACTGGTGCTCCAACACCTTCACCACAAAGTGATGTTCCAGCAACTTCACCAAAAAGTGGTGCTCCAGCACCTTCACCAAAAACTAGTTCTGCTTCAGATGACAATCGGGTCAACCAGATGCTTTTGGTGTTCATCTTTGTCTTGATTTGTGGTATCTCTTCAAATAACATCAGTTACTAG 594 0.4108 MEILSFKKIVMMMITMMLVNMAKSELHYVGGNKTTWAANVNFTEWSSSEHFHLMDWIYFGYERHEYSVLEVNKTSYENCIEKGFIQNVSRGAGRDVFQLTEFKTYYFLSGGGHCWDGVKVAITVTEGVASPTPAPSPKTGAPTPSPQSDVPATSPKSGAPAPSPKTSSASDDNRVNQMLLVFIFVLICGISSNNISY* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2338 197 Gene3D - 24 130 IPR008972 -
Gso2g2338 197 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Gso2g2338 197 Pfam Plastocyanin-like domain 36 117 IPR003245 GO:0009055
Gso2g2338 197 PANTHER OS03G0758500 PROTEIN 10 146 - -
Gso2g2338 197 PANTHER BLUE COPPER PROTEIN 10 146 IPR039391 GO:0009055
Gso2g2338 197 MobiDBLite consensus disorder prediction 129 171 - -
Gso2g2338 197 MobiDBLite consensus disorder prediction 145 171 - -
Gso2g2338 197 SUPERFAMILY Cupredoxins 26 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2338 Gso-Chr2 47959019 47960741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2338 10 157 Phytocyanin Superfamily AT2G27035 43.919 7.73e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2338 - - gmx:100812663 371.703