Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2337 ATGGTGTTGATGATGATGATGACCATGGTGCTGGCAAACATGGCTAAATCAGAGCTTCACTACGTTGGTGGGGACAAGTCTAGTTGGGGACCTAATGTTAACTTGACAGAATGGTCAAGTCATGAGCACTTCCATTTGGAAGATTGGCTTTACTTTGGATACGATAGAAACGAGTATAATGTACTAGAGGTGAACAAGACTGGTTATGAGAACTGCGTGGACACAGGATTTGTTCAAAACATATCAAGGGGTGCAGGAAGAGACGTGTTTCATCTAACAGAATTCAAGACCTACTACTTCTTAAGTGGAGGAGGCTATTGTTGGCATGGGATGAAGGTTGCTATATCTGTTACTGAAGGTGTTTCTGCACCCAATCCAGCCACTTCACCAAAAGGTGGTGCTCAAGCAAGTTCGCCAAAAAGTGGTTGTGCTTCAGACGGCATTCAAGTCAACCAAAAACTTTTGGAGTTCATCTTTGTCTTGATGTGGAGCATCTCTTCAATTAACATCAGTTACTAG 519 0.4277 MVLMMMMTMVLANMAKSELHYVGGDKSSWGPNVNLTEWSSHEHFHLEDWLYFGYDRNEYNVLEVNKTGYENCVDTGFVQNISRGAGRDVFHLTEFKTYYFLSGGGYCWHGMKVAISVTEGVSAPNPATSPKGGAQASSPKSGCASDGIQVNQKLLEFIFVLMWSISSINISY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2337 172 Gene3D - 17 123 IPR008972 -
Gso2g2337 172 PANTHER OS03G0758500 PROTEIN 2 161 - -
Gso2g2337 172 Pfam Plastocyanin-like domain 30 111 IPR003245 GO:0009055
Gso2g2337 172 ProSiteProfiles Phytocyanin domain profile. 18 119 IPR003245 GO:0009055
Gso2g2337 172 PANTHER BLUE COPPER PROTEIN 2 161 IPR039391 GO:0009055
Gso2g2337 172 SUPERFAMILY Cupredoxins 19 117 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2337 Gso-Chr2 47952539 47954443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2337 1 139 Phytocyanin Superfamily AT2G27035 43.165 2.97e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2337 - - gmx:100812113 353.984