Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2327 ATGGAACACAAAGTAGCCACAACAACTGAAGGACAATCCATAAGATGTAAAGGTGAACCACTGAGTATTGAGGAGATCATTGTGGCGCCACCAATGCCTGGTGAAGCTCGCATTCGTATTATATGCTCCTCTCTCTGTCAAACCGATATCAGTTTTCGGAACATGCAGGACCATCCTGCCATTTATCCAAGAATTCTGGGTCACGAGGCAATAGGGGTTGTGGAAAGTGTAGGAGAGGATGTAACTGAAGTTACAAAAGGAGATGTGGTTGTTCCAATTTTCTTACCTGATTGTGGGGAGTGTATCGATTGCAAATCAAGCAAGAGCAACCTTTGTTCAAAGTTTCCATTTGAGGTGTCTCCCTGGATGCCTAGATATGCCACTTCTAGATTCACAGATTTAAAAGGAGAGATCATACATCATTTCTTGTCTGTTTCTAGTTTTAGCGAGTACACTGTGGTCGACATTGCCCATCTAATCAAGATTGATCCGGCAATACCACCCAACAGGGCATGCCTCATCAGCTGTGGTATATCAGCAGGGATAGGTGCTGCTTGGAGAGCAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGGCTGGGGAGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAAGATTATAGGTGTGGATGTCAACCCAGAAAGATATGAAATCGGAAAAAGGTTTGGACTCACGGACTTTGTCCATTCTGGAGAATGTGAAAATAAATCTGTGAGCCAGGTTATCATAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGATGCACGAGGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAATAGTTTTGGGAGTGGACAAGCCAGGATCCAAGTTGAACCTTAGCTGTAGTGAGGTCCTAGTTAGTGGGAAGAGCCTCAGGGGATGTTTATTTGGAGGACTCAAACCTAAGTCTCATGTACCCATTCTCCTTAAACGCTACATGGACAAGGAACTGAATTTGGACGAGTTTGTCACACATGAGATGGAGTTCAAGGATATCAATAAAGCTTTTGATCTATTGATTGAAGGACAGTGTCTTCGATGTGTGATTTGGATGGACAAATGA 1143 0.4401 MEHKVATTTEGQSIRCKGEPLSIEEIIVAPPMPGEARIRIICSSLCQTDISFRNMQDHPAIYPRILGHEAIGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEVSPWMPRYATSRFTDLKGEIIHHFLSVSSFSEYTVVDIAHLIKIDPAIPPNRACLISCGISAGIGAAWRAAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPERYEIGKRFGLTDFVHSGECENKSVSQVIIEMTGGGADYCFECVGMASLMHEAYASCRKGWGKTIVLGVDKPGSKLNLSCSEVLVSGKSLRGCLFGGLKPKSHVPILLKRYMDKELNLDEFVTHEMEFKDINKAFDLLIEGQCLRCVIWMDK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2327 380 Pfam Alcohol dehydrogenase GroES-like domain 33 162 IPR013154 -
Gso2g2327 380 Gene3D - 16 373 - -
Gso2g2327 380 PANTHER ALCOHOL DEHYDROGENASE 11 377 - -
Gso2g2327 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Gso2g2327 380 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 11 377 - -
Gso2g2327 380 SUPERFAMILY GroES-like 329 377 IPR011032 -
Gso2g2327 380 SUPERFAMILY GroES-like 9 187 IPR011032 -
Gso2g2327 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 341 IPR036291 -
Gso2g2327 380 Pfam Zinc-binding dehydrogenase 205 325 IPR013149 -
Gso2g2327 380 Gene3D - 181 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2327 Gso-Chr2 47866773 47870352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2327 35 202 Monolignol Biosynthesis Gene Families AT4G37970 25.731 2.56e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2327 K00121 - gmx:100788587 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0358 14 3231015 3234499 Gso2g2327 2 47866773 47870352 GST