Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2326 ATGGAACATAAATTAGCAACAACTGAAGGACAACCCATAAGATGTAAAGCGGCGGTTTGTCGCAAAGCTGGTGAGCCACTGGGTATTGAGGAGATCATGGTGGCGCCACCAATGCCTGGTGAAGCTCGCATTCGTATTATATGCTCCTCTCTCTGTCGAACTGATATCAGTTTCCGGAACATGCAGGGGCCTCCGGCCAATTTCCCAACAATTCTGGGTCATGAGGCAATAGGGGTTGTGGAGAGCGTAGGAGAGGATGTAACTGAAGTTGCAAAAGGAGATATGGTTGTCCCAATTTTCATAGCTGAATGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAACCTTTGTTCAAAGTTTCCTTTCAAGCTGTCTCCTTGGATGCCTAGACATGCCACTTCTAGATTCGTGGATTTAAAAGGAGAGATCATACACCACTTCTTGTCTGTTTCTAGTTTTAGCGAGTACACCGTGGTCGACATCGCCCATCTAACCAAGATTGATCCGGAAGTTCCTCCCAGCAAGGCATGCCTCCTCAGTTGTGGTGTATCAACCGGGGTAGGTGCTGCTTGGAGAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTCGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACAAGGATTATAGGTGTGGATATCAACTCAGAAAAATATGAAATCGGAAAGAAGTTTGGAATCACGGATTTTGTTCATTCTGGAGAATGTGAAAACAAATCTGCGAGCCAGGTTATCATAGAGATGACTGATGGAGGAGCAGATTATTGTTTTGAATGTGTTGGTAATGCATCATTGATGCATGAGGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATAGTTTTGGGATCGGACAAGCCAGGCTCCAAGTTGAGCCTTAGCTGTAGTGAGATCCTCGTTAGTGGGAAGAGCCTCGTGGGATGCATGTTTGGAGGACTCAAACCCAAGTCTCATGTGCCTATTCTCATTAAACGCTACTTGGACAAGGAACTGAATTTGGATGGGTTTGTCACACATGAAGTGGAGTTCAAAGATATCAACAAAGCTTTTGATTTAATGATTAAAGGACAGTGTCTTCGATGTGTGATTTGGATGGACAAATGA 1161 0.4496 MEHKLATTEGQPIRCKAAVCRKAGEPLGIEEIMVAPPMPGEARIRIICSSLCRTDISFRNMQGPPANFPTILGHEAIGVVESVGEDVTEVAKGDMVVPIFIAECGECIDCKSSKSNLCSKFPFKLSPWMPRHATSRFVDLKGEIIHHFLSVSSFSEYTVVDIAHLTKIDPEVPPSKACLLSCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDINSEKYEIGKKFGITDFVHSGECENKSASQVIIEMTDGGADYCFECVGNASLMHEAYASCRKGWGKTIVLGSDKPGSKLSLSCSEILVSGKSLVGCMFGGLKPKSHVPILIKRYLDKELNLDGFVTHEVEFKDINKAFDLMIKGQCLRCVIWMDK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2326 386 Pfam Zinc-binding dehydrogenase 211 331 IPR013149 -
Gso2g2326 386 Gene3D - 18 379 - -
Gso2g2326 386 SUPERFAMILY GroES-like 335 383 IPR011032 -
Gso2g2326 386 SUPERFAMILY GroES-like 8 193 IPR011032 -
Gso2g2326 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 172 347 IPR036291 -
Gso2g2326 386 Pfam Alcohol dehydrogenase GroES-like domain 39 167 IPR013154 -
Gso2g2326 386 Gene3D - 187 327 - -
Gso2g2326 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Gso2g2326 386 PANTHER ALCOHOL DEHYDROGENASE 8 383 - -
Gso2g2326 386 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 8 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2326 Gso-Chr2 47861433 47865766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2326 40 374 Monolignol Biosynthesis Gene Families AT2G21730 23.295 2.76e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2326 K00121 - gmx:100788053 789.645