Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2297 ATGGAACACAGTTTCAGATTACCAGTTTTCTTCTTGTTATGTGCCTCTATAGCGTTCAGTGCAGAATCCAAGTGTAGCAGGGGTTGTGATTTAGCTCTAGCTTCCTACTATCTATCACAAGGTGACTTGACATATGTATCAAAGCTTATGGAATCTGAGGTTGTTTCAAAACCTGAAGATATTCTCAGCTACAACACTGACACCATAACAAACAAAGACCTGTTGCCTGCCTCTATCAGAGTGAACGTTCCATTCCCTTGTGACTGCATTGATGAAGAGTTTCTTGGCCATACTTTTCAATACAACCTTACAACAGGAGACACTTATTTGTCCATTGCCACTCAGAACTACTCTAATTTGACCACTGCTGAGTGGTTGCGGAGCTTCAACAGATATTTACCAGCTAATATTCCTGATAGTGGGACTCTTAATGTCACCATTAACTGTTCCTGTGGGAATAGTGAAGTTTCCAAGGATTATGGATTGTTCATCACGTACCCTCTTAGACCTGAGGATTCTTTGCAGTCGATTGCCAACGAGACTGGCGTTGATCGTGACTTGCTGGTTAAGTACAACCCGGGTGTAAATTTTAGCCAAGGGAGTGGTCTGGTTTATATTCCAGGAAAAGACCAAAATGCTATCTATGTGCCCCTTCATCTAAGCTCTGGAGGTCTTGCGGGTGGTGTTATTGCTGGAATATCTATTGGAGTAGTAACAGGACTTCTGCTATTGGCATTTTGTGTGTATGTTACATATTACCGAAGAAAGAAGGTATGGAAGAAGGATTTGCTCTCAGAAGAATCCAGGAAGAACTCTGCTAGAGTTAAGAATGTCCCTCTTTCAGATGAAGCCTCTGGTGATTCGGCTGCAGAAGGTGGTACTAACACCATTGGCATTAGGGTGAACAAATCAGCAGAGTTTTCATATGAGGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTCTATTATGCAGAGCTGAATGGAGAGAAAGCTGCAATAAAAAAGATGGACATACAAGCAACAAGAGAATTTCTTGCGGAATTGAAAGTGTTGACACATGTTCATCACTTGAACCTGGTGCGCTTGATTGGATATTGTGTTGAGGGCTCCCTTTTTCTTGTCTATGAGTACATTGAGAATGGCAACTTAGGACAACATCTACGTAAATCAGGTTTCAATCCTTTGCCATGGTCTACCCGAGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTCAATACATTCATGAGCATACGGTACCTGTATATATCCATCGTGACATAAAGTCGGAAAACATTTTAATAGACAAAAACTTCGGTGCAAAGGTTGCAGACTTTGGATTAACCAAGTTGATTGATGTTGGAAGTTCATCACTTCCCACTGTTAATATGAAGGGCACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGGTAAAGAAGCATTGAGCAGAGGTGGTGTCTCTGGTGCTGAACTAAAGGGCCTTGTATCTTTGTTTGATGAAGTATTTGATCAGCAAGATACCACAGAAGGTCTTAAAAAACTGGTGGATCCTAGGCTTGGAGATAACTACCCAATTGATTCAGTTTGCAAGATGGCACAACTTGCTAGAGCATGCACAGAGAGCGATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAACTACTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAACTCTTGCAAATCTAATGTCTGGTAAATAA 1854 0.4105 MEHSFRLPVFFLLCASIAFSAESKCSRGCDLALASYYLSQGDLTYVSKLMESEVVSKPEDILSYNTDTITNKDLLPASIRVNVPFPCDCIDEEFLGHTFQYNLTTGDTYLSIATQNYSNLTTAEWLRSFNRYLPANIPDSGTLNVTINCSCGNSEVSKDYGLFITYPLRPEDSLQSIANETGVDRDLLVKYNPGVNFSQGSGLVYIPGKDQNAIYVPLHLSSGGLAGGVIAGISIGVVTGLLLLAFCVYVTYYRRKKVWKKDLLSEESRKNSARVKNVPLSDEASGDSAAEGGTNTIGIRVNKSAEFSYEELANATNNFSLANKIGQGGFGVVYYAELNGEKAAIKKMDIQATREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLGQHLRKSGFNPLPWSTRVQIALDSARGLQYIHEHTVPVYIHRDIKSENILIDKNFGAKVADFGLTKLIDVGSSSLPTVNMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISGKEALSRGGVSGAELKGLVSLFDEVFDQQDTTEGLKKLVDPRLGDNYPIDSVCKMAQLARACTESDPQQRPNMSSVVVTLTALTSTTEDWDIASIIENPTLANLMSGK* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2297 617 Gene3D Phosphorylase Kinase; domain 1 292 389 - -
Gso2g2297 617 CDD STKc_IRAK 325 592 - -
Gso2g2297 617 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Gso2g2297 617 PANTHER LYSM RECEPTOR KINASE 1B 4 617 - -
Gso2g2297 617 SMART serkin_6 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2297 617 Pfam Protein tyrosine and serine/threonine kinase 321 588 IPR001245 GO:0004672|GO:0006468
Gso2g2297 617 ProSiteProfiles Protein kinase domain profile. 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2297 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Gso2g2297 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 617 IPR044812 GO:0019199|GO:0045087
Gso2g2297 617 SUPERFAMILY Protein kinase-like (PK-like) 301 589 IPR011009 -
Gso2g2297 617 Gene3D Transferase(Phosphotransferase) domain 1 390 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2297 Gso-Chr2 47617200 47622280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2297 12 617 Receptor kinase-like Gene Family AT3G21630 56.891 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso2g2297 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2297 - K13429 gmx:100803042 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0394 14 3632091 3644032 Gso2g2297 2 47617200 47622280 GST