Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2287 ATGGCCACAATCCAGTGCGCCACAACCACCCTAATACTGTTACTCCTCCTCCTCCTCATCATACCAAGATCCAATTCCCAACAAGAGTACGTAAACAACAAGCAACTAGACTGCAACAACGAATACAACTCCACAAAGGGTAACCTCTGCAACAGTCTCCCGTCATGCACCTCCTACCTCACCTTCAAGTCCTCCCCGCCGGAATACACCACCCCCGCCGCCATCTCCTTCCTCCTCAACTCCACTCCGGCCCTCATCGCCGCCGCCAACAACATCACCGACGTCCAGACCCTCCCGGCCGACACCCTCGTCACCGTCCCCGTCAACTGCTCCTGCTCCGGCCCCTACTACCAGCACAACGCCTCCTACACCATCAAAGTCCAAGGCGAAACCTACTTCTCCATCGCCAACAACACCTACCAGGCCCTCACCACGTGTCAGGCCCTCGAGCTTCAAAACACCGTCGGCATGCGCGACCTCCTCAAGGGTCAGAACCTCCACGTGCCTCTCAGGTGCGCGTGTCCCACGCAGAAGCAGCGCGAGGCAGGGTTCAAGTACTTGCTCACTTACTTGGTTTCTCAAGGAGAATCGGTTTCCGCCATTGGAGATATCTTCGGTGTCGACGAACAGAGCATTCTCGACGCCAACGAGCTTTCTACTTCTTCCGTTATTTTCTACTTCACGCCGATTTCGGTTCCTTTGAAAACAGAGCCACCGGTTACAATACCGAGAGCAGCGATTCCCCCGGAGGATTCCCCGTCGCCGCCGCTGCCGCCTGCTCCGGCGGGGGACGGAGATTCCGACTCTTCCAAGAAATGGGTCATTGTCGGAATCGTGGTTGGGGTTGTTGTGTTGCTTATTTTAGGTGCTGCTCTGTTTTACCTCTGTTTCTATCGGCGGCGGCGGCGGGTGGAACACCCTCCGCCGCCGCCTTCAGCGAAGGCTTTCTCGGGCTCTACCACCACGAAGGCGACTATTCCGACGACGCAGTCGTGGTCTCTTTCCTCGGAAGGGGTTCGTTACGCGATTGAATCGTTGAGTGTGTACAAGTTCGAGGAGTTGCAGAAGGCTACGGGGTTCTTCGGCGAAGAGAACAAGATCAAGGGTTCTGTTTATAGGGCTTCTTTCAAGGGTGATTATGCCGCGGTGAAGATTCTCAAAGGTGATGTGTCGGGTGAGATTAACCTTCTCAGGAGGATTAACCACTTCAACATTATAAGGTTGTCGGGTTTCTGTGTCTACAAAGGTGACACCTATCTTGTGTACGAGTTCGCGGAGAATGATTCTCTTGAGGATTGGCTTCACAGTGGTAGCAAGAAGTACGAGAATTCTACATCTCTGAGTTGGGTGCAGAGGGTTCATATTGCTCATGATGTTGCTGACGCACTTAACTACCTTCATAACTATACTAGTCCTCCTCACGTACACAAGAATTTGAAGAGTGGGAACGTGCTTTTGGATGGCAATTTTAGGGCTAAAGTTTCGAATTTGGGATTGGCAAGAGCTGTGGAGGATCACGGGGATGATGGGGGGTTTCAATTGACAAGGCATGTGGTGGGGACTCATGGGTACATGGCACCTGAGTACATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCGTTTGGGGTTGTGCTTTTGGAGCTTCTTTCGGGGAGAGAAGCTGTTGTTGGTGGAGACCAGAATGGATCTGGGGAGAAGATGCTGTCGGCAACTGTGAATCACGTGCTTGAAGGAGAGAATGTTAGAGAGAAACTTAGAGGTTTCATGGATCCAAATTTGAGAGATGAATATCCCTTGGAACTGGCTTATTCCATGGCCGAACTTGCCAAACTCTGTGTTGCTCGTGACCTCAATGCAAGGCCACAGATTTCTGAAGCTTTCATGATTTTGTCTAAGATTCAATCCTCCACGTTGGATTGGGATCCGTCTGACGAGCTTGAACGGTCTAGATCTGTTGGCCAAATCTCTGATAGCAGCAGATAG 1992 0.5156 MATIQCATTTLILLLLLLLIIPRSNSQQEYVNNKQLDCNNEYNSTKGNLCNSLPSCTSYLTFKSSPPEYTTPAAISFLLNSTPALIAAANNITDVQTLPADTLVTVPVNCSCSGPYYQHNASYTIKVQGETYFSIANNTYQALTTCQALELQNTVGMRDLLKGQNLHVPLRCACPTQKQREAGFKYLLTYLVSQGESVSAIGDIFGVDEQSILDANELSTSSVIFYFTPISVPLKTEPPVTIPRAAIPPEDSPSPPLPPAPAGDGDSDSSKKWVIVGIVVGVVVLLILGAALFYLCFYRRRRRVEHPPPPPSAKAFSGSTTTKATIPTTQSWSLSSEGVRYAIESLSVYKFEELQKATGFFGEENKIKGSVYRASFKGDYAAVKILKGDVSGEINLLRRINHFNIIRLSGFCVYKGDTYLVYEFAENDSLEDWLHSGSKKYENSTSLSWVQRVHIAHDVADALNYLHNYTSPPHVHKNLKSGNVLLDGNFRAKVSNLGLARAVEDHGDDGGFQLTRHVVGTHGYMAPEYIENGLITPKMDVFAFGVVLLELLSGREAVVGGDQNGSGEKMLSATVNHVLEGENVREKLRGFMDPNLRDEYPLELAYSMAELAKLCVARDLNARPQISEAFMILSKIQSSTLDWDPSDELERSRSVGQISDSSR* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2287 663 ProSiteProfiles Protein kinase domain profile. 282 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2287 663 Gene3D Transferase(Phosphotransferase) domain 1 425 652 - -
Gso2g2287 663 Gene3D Phosphorylase Kinase; domain 1 323 424 - -
Gso2g2287 663 Pfam Protein kinase domain 389 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2287 663 PANTHER PROTEIN LYK5 15 653 - -
Gso2g2287 663 MobiDBLite consensus disorder prediction 242 262 - -
Gso2g2287 663 SUPERFAMILY Protein kinase-like (PK-like) 340 630 IPR011009 -
Gso2g2287 663 Pfam LysM domain 190 233 IPR018392 -
Gso2g2287 663 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 653 - -
Gso2g2287 663 SMART LysM_2 189 233 IPR018392 -
Gso2g2287 663 SMART LysM_2 122 169 IPR018392 -
Gso2g2287 663 MobiDBLite consensus disorder prediction 241 265 - -
Gso2g2287 663 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Gso2g2287 663 MobiDBLite consensus disorder prediction 642 663 - -
Gso2g2287 663 CDD LysM 189 225 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2287 Gso-Chr2 47529969 47532633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2287 1 656 Receptor kinase-like Gene Family AT2G33580 53.608 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso2g2287 Pkinase 3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2287 - - gmx:100818534 1229.16