Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2283 ATGATGATGTCCACAAAGCTTGTATCGTTTCAGTTGATTATTATATTCACTTTCTTCTGTTCACTTTTAAGGCTCTCTTATTTGGAAGTTTCTGGCATTTCTTTTGCCAATGCTACTGTTATGGTTGGCTATGAAGCTGCAGAAGATGAAGACATTGAAGCAATAAGTGCTCTATTGAAGTGGAAAGCCAACCTTGATAACCAAAGCCAGGCTTTCTTGTCTTCTTGGTCCACCTTTACTTGCCCTTGCAAGTGGAAAGGAATTGTTTGTGATGAATCCAACTCTGTCAGCACTGTAAATGTTTCAAATTTTGGACTAAAAGGTACACTTCTCAGTCTAAACTTTCCGTCATTTCATAAGCTCCTCAATCTGGATGTAAGTCACAACTTCTTCTATGGATCTATTCCCCACCAAATTGGTAACATGTCCAGAATTTCTCAGTTGAAAATGGATCATAATCTTTTTAATGGTTTCATCCCGCCAACAATTGGTATGTTGACAAATCTTGTTATACTTGATTTGTCATCCAACAATCTCTCTGGTGCAATCCCTTCAACTATTAGAAACTTGACAAATTTGGAACAACTTATCCTCTTTAAAAACATTCTCTCAGGCCCTATTCCTGAGGAGTTGGGAAGACTTCATTCTCTCACAATAATCAAATTGCTAAAAAATGATTTTTCTGGGTCAATCCCATCTTCCATAGGAGACTTGGCTAATTTGAGAACACTTCAACTCAGTCGTAATAAACTTCATGGATCAATTCCTTCCACTCTTGGAAACTTGACAAACCTCAATGAATTGTCCATGTCTAGAAACAAGCTTTCTGGATCAATTCCAGCTTCCGTTGGAAACTTGGTCTATCTACAGAAGCTTCACCTTGCAGAAAATGAACTTTCTGGGCCTATTCCATCTACCTTCAGAAATTTGACAAATCTCACCTTCCTATTACTTCATATGAACAACCTTAGTGGTAGTTTTTCAACAGCAATAAGTAACCTTACCAATTTAATAAACTTACAACTAAGCTCGAATCATTTCACTGGCCCTTTGCCTCAACATATTTTTGGAGGGTCACTTTTATATTTTGCTGCCAATAAGAATCATTTCATTGGTCCAATTCCAACAAGTTTGAAGAACTGCTCCAGCCTTGTTAGGCTCAACCTTGCAGAAAATATGTTGACCGGAAATATTTCAAATGATTTTGGTGTATATCCAAATTTGAACTACATTGATCTGAGTAGCAATTGCCTTTATGGCCACCTTTCATCAAATTGGGCCAAAAGCCATGATCTCATAGGCCTAATGATTTCATACAATAGTTTATCCGGTGCTATACCCCCAGAGCTAGGTCAGGCACCTAAGTTACAAAAGCTTGAACTGTCTTCAAATCATCTAACAGGAAAAATTCCAAAAGAACTTGGCAACTTGACCTCCTTGACTCAACTCTCCATAAGTAACAACAAACTTTCAGGCAACATTCCCATAGAAATAGGATCTTTAAAGCAACTTCATCGCTTGGATCTTGCAACAAATGATTTAAGTGGCTCAATCCCAAAACAGCTCGGAGGGTTGCTCAGTTTAATTCACTTAAACTTAAGCCATAACAAATTCATGGAAAGCATTCCCTCTGAATTTAGCCAATTGCAATTTCTTCAAGATCTTGATCTTAGTGGAAATTTTTTAAATGGAAAAATTCCAGCAGCACTTGGAAAATTGAAGGTATTGGAAATGTTGAACCTCTCCCACAACAGTCTCTCTGGATCCATTCCTTGTAATTTTAAGCATATGTTGAGCTTGACAAATGTTGACATATCTAACAACCAATTAGAGGGTGCAATTCCAAACAGTCCAGCCTTCCTTAAGGCACCATTTGAAGCATTGGAAAAAAACAAACGCTTGTGTGGTAATGCTTCAGGGTTGGAACCTTGTCCATTGAGTCACAATCCTAATGGTGAAAAGAGAAAGGTCATAATGTTGGCACTATTCATTAGTTTGGGTGCACTATTGCTAATAGTGTTTGTGATTGGAGTTTCATTATATATTCATTGGCAAAGAGCAAGAAAAATAAAAAAGCAGGACACGGAAGAACAAATTCAAGATCTTTTTTCCATATGGCATTATGATGGAAAAATAGTGTACGAAAATATAATCGAAGCAACAAATGATTTTGATGACAAATATCTCATTGGAGAAGGGGGGTTTGGATGTGTTTACAAGGCTATCTTGCCCTCTGGCCAGATTGTTGCTGTGAAAAAACTTGAGGCTGAAGTGGACAATGAAGTGCGTAATTTTAAGGCTTTTACAAGTGAAGTTCAGGCCTTGACAGAAATCAAACATCGTCACATTGTGAAGTTGTATGGATTTTGTGCGCATCGGCATTATTGTTTTTTGGTTTATGAGTTCCTAGAAGGTGGCAGCTTGGATAAAGTCCTAAACAACGACACACATGCAGTGAAGTTTGATTGGAATAAGAGGGTTAACGTTGTTAAAGGTGTGGCAAATGCTTTGTATCATATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGCGACATATCAAGCAAGAATGTTCTTATAGATTTGGAATTTGAAGCTCGCATCTCTGACTTTGGAACAGCAAAGATTCTAAATCATAATTCACGCAATTTGAGTTCGTTTGCAGGCACTTATGGATATGCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAATGTGATGTCTTCAGTTTTGGGGTCCTTTGTTTGGAAATAATAATGGGAAATCATCCAGGCGATCTCATTTCTTCAATGTGTTCACCCTCTTCAAGACCAGTAACATCTAATTTGCTATTGAAGGATGTGCTGGACCAAAGACTTCCTCTTCCAATGATGCCAGTTGCTAAGGTGGTGGTCTTGATTGCAAAAGTGGCATTTGCTTGTTTGAATGAACGACCACTTTCTCGCCCAACCATGGAAGATGTGTACAACATGTTTGTGATGCATAAATCACCTTTAATGAAGGAGACATTAGACACCATTGCACTTGGACAACTTCAAAATCATTGA 3054 0.3805 MMMSTKLVSFQLIIIFTFFCSLLRLSYLEVSGISFANATVMVGYEAAEDEDIEAISALLKWKANLDNQSQAFLSSWSTFTCPCKWKGIVCDESNSVSTVNVSNFGLKGTLLSLNFPSFHKLLNLDVSHNFFYGSIPHQIGNMSRISQLKMDHNLFNGFIPPTIGMLTNLVILDLSSNNLSGAIPSTIRNLTNLEQLILFKNILSGPIPEELGRLHSLTIIKLLKNDFSGSIPSSIGDLANLRTLQLSRNKLHGSIPSTLGNLTNLNELSMSRNKLSGSIPASVGNLVYLQKLHLAENELSGPIPSTFRNLTNLTFLLLHMNNLSGSFSTAISNLTNLINLQLSSNHFTGPLPQHIFGGSLLYFAANKNHFIGPIPTSLKNCSSLVRLNLAENMLTGNISNDFGVYPNLNYIDLSSNCLYGHLSSNWAKSHDLIGLMISYNSLSGAIPPELGQAPKLQKLELSSNHLTGKIPKELGNLTSLTQLSISNNKLSGNIPIEIGSLKQLHRLDLATNDLSGSIPKQLGGLLSLIHLNLSHNKFMESIPSEFSQLQFLQDLDLSGNFLNGKIPAALGKLKVLEMLNLSHNSLSGSIPCNFKHMLSLTNVDISNNQLEGAIPNSPAFLKAPFEALEKNKRLCGNASGLEPCPLSHNPNGEKRKVIMLALFISLGALLLIVFVIGVSLYIHWQRARKIKKQDTEEQIQDLFSIWHYDGKIVYENIIEATNDFDDKYLIGEGGFGCVYKAILPSGQIVAVKKLEAEVDNEVRNFKAFTSEVQALTEIKHRHIVKLYGFCAHRHYCFLVYEFLEGGSLDKVLNNDTHAVKFDWNKRVNVVKGVANALYHMHHGCSPPIVHRDISSKNVLIDLEFEARISDFGTAKILNHNSRNLSSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLEIIMGNHPGDLISSMCSPSSRPVTSNLLLKDVLDQRLPLPMMPVAKVVVLIAKVAFACLNERPLSRPTMEDVYNMFVMHKSPLMKETLDTIALGQLQNH* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2283 1017 Coils Coil 751 771 - -
Gso2g2283 1017 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 192 1015 - -
Gso2g2283 1017 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 194 - -
Gso2g2283 1017 PRINTS Leucine-rich repeat signature 169 182 - -
Gso2g2283 1017 PRINTS Leucine-rich repeat signature 238 251 - -
Gso2g2283 1017 SMART LRR_typ_2 310 333 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 477 501 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 573 596 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 525 549 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 238 261 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 334 358 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 166 190 IPR003591 -
Gso2g2283 1017 SMART LRR_typ_2 262 286 IPR003591 -
Gso2g2283 1017 SUPERFAMILY Protein kinase-like (PK-like) 706 995 IPR011009 -
Gso2g2283 1017 Gene3D Ribonuclease Inhibitor 53 210 IPR032675 -
Gso2g2283 1017 ProSitePatterns Protein kinases ATP-binding region signature. 730 753 IPR017441 GO:0005524
Gso2g2283 1017 Gene3D Transferase(Phosphotransferase) domain 1 803 1008 - -
Gso2g2283 1017 Pfam Leucine rich repeat N-terminal domain 55 91 IPR013210 -
Gso2g2283 1017 Gene3D Phosphorylase Kinase; domain 1 684 802 - -
Gso2g2283 1017 ProSitePatterns Tyrosine protein kinases specific active-site signature. 848 860 IPR008266 GO:0004672|GO:0006468
Gso2g2283 1017 ProSiteProfiles Protein kinase domain profile. 724 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2283 1017 SUPERFAMILY RNI-like 99 419 - -
Gso2g2283 1017 SMART LRR_sd22_2 166 192 - -
Gso2g2283 1017 SMART LRR_sd22_2 310 336 - -
Gso2g2283 1017 SMART LRR_sd22_2 262 283 - -
Gso2g2283 1017 SMART LRR_sd22_2 477 498 - -
Gso2g2283 1017 SUPERFAMILY L domain-like 364 636 - -
Gso2g2283 1017 Gene3D Ribonuclease Inhibitor 358 646 IPR032675 -
Gso2g2283 1017 Gene3D Ribonuclease Inhibitor 222 357 IPR032675 -
Gso2g2283 1017 Pfam Leucine rich repeat 503 560 IPR001611 GO:0005515
Gso2g2283 1017 Pfam Leucine rich repeat 435 490 IPR001611 GO:0005515
Gso2g2283 1017 Pfam Leucine rich repeat 240 299 IPR001611 GO:0005515
Gso2g2283 1017 Pfam Protein kinase domain 726 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2283 1017 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 194 - -
Gso2g2283 1017 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 192 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2283 Gso-Chr2 47479336 47482708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2283 39 896 Receptor kinase-like Gene Family AT4G08850 43.355 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso2g2283 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2283 - - gmx:100800924 1959.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0406 14 3788731 3792272 Gso2g2283 2 47479336 47482708 GST