Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2281 ATGTTACGTGGAGAATCTTCCTCAAACTCTTGGCGATGGACATACCATGTTTTCTTGAGTTTTAGAGGAGAAGACACCCGTTTAGATTTTACAGATCACTTGTACGCTGCGTTAGTGCGAAAGGGAATCATAGCTTTTCGAGATGACAAACAACTCGAGAAAGGAGATGCGATTGCAGAAGAACTCCCTAAAGCAATTGAGGAGTCCCTTGGTGCCATAGTCATTCTCTCTGAGAACTATGCTTCTTCCTCTTGGTGTTTGGATGAGCTCAACAAAATTCTTGAATCAAATAGAGTTCTGGGGAGGGAAGTTTTTCCAGTCTTCTATGGGGTTAGTCCTGGTGAGGTTCAACACCAGAAGACCCAGAGTTTTTATGAGGCTTTTAAGAAACATGAAAGAAGATCTGGGAAAGACACAGAAAAGGTGCAAAAATGGAGAGATTCCTTGAAGGAACTTGGCCAAATTCCTGGTTGGGAGTCCAAACATTATCAGCATCAAACAGAGCTCATTGAAAATATTGTTGAATCGGTATGGACAAAACTTCGTCCTAAAATGCCATCTTTCAATGATGGGCTAATTGGAATTGGCTCTAGAGTTAAGAAAATGGATTCACTTCTAAGCATAGAATCGGAGGGCGTTCGCTTTATCGGAATATGGGGCATGGGTGGCATTGGAAAGACAACAGTAGCGAGAGTTGTCTTCCAGAAAATCAAGGATCAGTTTGATGTTAGCTGCTTCCTTGACAACGTTAGAGAGATTTCTAGAGAAACCAATGGCATGCTTCGCTTGCAAACAAAACTTCTGTCTCATTTGGCAATAAAAGGCTTAGAAATTATCGATTTGGACGAAGGAAAGAACACAATAATAAACCTTTTATCCGAGAAGAAAGTTTTACTTATCCTTGATGATGTTGATGACACTAGCCAACTAGATAATTTGGCTAAGAGGGTAGAATGGTTTGGACGTGGGAGCAGAGTTATAATCACAACAAGAGACACACAAGTATTAATATCACATGGAGTAGTTGAAAATTACAACATTGAGTTCTTAAATTCGGATGAATCCCTTCAACTCTTGAGTCAGAAAGCCTTCAAAAGAGATGAACCTCTAGAGCATTATTTGGAGTTGTCAAAAGTTGTAGCCAAACATGCTGGAGGCCTTCCTTTGGCCTTGGAGCTTTTAGGTTCATTTCTTTGTGGAAGAAGTGAATTCCAATGGAGAGAAGTTGTGGATATGATAAAAGAAGTCTCTGCCAGTCATATTGTGATGAAATCGCTTAGAATAAGCTACAATGGGTTACCACGATGTCATAAAGCTTTGTTTCTTGATATTGCATGCTTCTTCAAAGGGAGGGTAAAAGAGCTTGCAACACAAACTCTAGAAATTTGTGACCGCTATCCAGCAGTTGGAATTGAACTTCTAGTTGAAAAATCATTGGCAACTTACGATGGCTTTACTATAGGGATGCATGACTTGCTTCAAGAAACAGCAAGGGAAATTGTTATAGAAGAATCTCATGTAGATGCTGGAAAACGTAGTAGGTTATGGTCTCTAGAGGACACAAATCAAGTATTAAAATACAGTAGGGAAAATGAATCGATTGAAGGCATAGCTTTGAACTCACCCGAAAAGGACGAAGCAAACTGGGATCCTGAAGCATTCTCAAGGATGTATAATCTTCGGCTACTTATCATAAGTTTTCCTATAAAACTTGCTCGTGGCCTCAAATGTCTTTGCAGTTCATTGAAATTTCTTCAGTGGAATGACTTTTCTTTGGAAACTCTGCCGCTTGGTGTGCAGCTAGATGAACTTGTAGAGTTGAAAATGTATTCCAGCAAAATAAAAAATATTTGGAATGGAAATCAAGCTTTTGCAAAGCTGAAGTTCATTGATTTGAGCTATTCTGAAGATCTAATTCAAACTCCAATAGTTTCTGGGGCTCCATGTCTTGAAAGAATGCTTCTTATAGGTTGTATAAACCTTGTTGAGGTTCACCCTTCAGTTGGACAGCACAAGAGACTTGTTGTATTGTGCATGAAGAACTGCAAAAATCTTCAAATCATGCCAAGAAAATTGGAAATGGATTCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAGGTTAAAAAACTCCCAGAATTTGGAAAGAATATGAAATCTTTATCACTGCTTAGTGTGGAGAATTGCATAAATCTTCTTTGCCTACCAAATTCTATTTGCAATTTGAAATCTCTTAGAAAACTCAACATTTCTGGCTGCTCAAGATTGTCAACACTGCCTAATGGTTTGAATGAAAATGAGTCTTTGGAGGAGCTTGATGTGAGTGGCACAGCTATAAGAGAAATTACTTTATCAAAAGTTCGTTTAGAAAAACTTAAAGAGCTCTCCTTTGGTGGAAGGAAAGAACTAGCACCCAACTCACAAAACTTGCTTCTATGGATCTCAAAGTTTATGAGGCAACCAAATCTGAAGGAGTCAACCATGCCTCCTCTTTCCAGCTTACTTGCCTTGGTGTCCTTGGATTTAAGTTACTGCGACCTTAACGATGAATCATTTCCTAGCCACCTTGGTTCTCTATCATTGTTGCAGGATTTAGATCTAAGTGGTAACAATTTTGTTAACCCACCTGCCCAGTGCATTATTAATCTTTCTATGTTGCAGAATTTGTCCTTCAATGATTGCCCAAGACTTGAATCCTTGCCAGTGCTTCCACCAAATTTACAAGGCTTGTATGCAAATAATTGTCCTAAATTGAAACCATTTAATTTGGATGAAGAAATGCTATGGAAGATATATGAGACACAATCACGTATGGATCCGATTGAAGGGCCCGAGGTTTGGTTCATCATACCAGGGAATGAAATTCCATGTTGGTTTGACAATCAAAACTGCCTTGCAATTGATTCATCACATCATCCATATGACAAGTTGGGTTGTGATTCAGTTACATCAATAACAGTGGATGTACCTAAGGATTGCCAGTTAAGTAAATGGTGGGGAATTGCAGTATGCCTAGTATTAGAACCTTCAAATATGGAGGAGGAGGACTCATCTCGATCTTATGTGAGACCAACTTCTACAGGAAATGAGGAAATGTGCATTTATTATTGGGTCTGTAAAGCTCCTGATCGAGACCCTGACCCAAAGTTTCCTATAGCATCCAAGTTTGGACACTTGGTTTACAAACTCAATGACCCTTACATCCATATTATATTCTTGAGTGCTGATCATGTATATATTCAGCATTATCTAAGTGGGGAGCAAATCCAACTCCAATTGATATTTTTTGTGGAGAATTGTTCTAAGTCATGTAAGGCAACAATAAAGAAGTGCGGGTGCCGTGTGGTATGTAAGGAAAAAATTGAAGAATGGCGCAAGCACTCAGATGGTCTTAATATATCAAGATTAACAGAAGTGAATGATGATGAGGAATTTCGTCGTGAATTGGTGGTGGAAGAGCCTACTTCTCCAAATACATTCTCTTCAACGGACAAAACAGCAGTAAACACTGCCCTTGATTGTGATAATGCATAA 3534 0.3896 MLRGESSSNSWRWTYHVFLSFRGEDTRLDFTDHLYAALVRKGIIAFRDDKQLEKGDAIAEELPKAIEESLGAIVILSENYASSSWCLDELNKILESNRVLGREVFPVFYGVSPGEVQHQKTQSFYEAFKKHERRSGKDTEKVQKWRDSLKELGQIPGWESKHYQHQTELIENIVESVWTKLRPKMPSFNDGLIGIGSRVKKMDSLLSIESEGVRFIGIWGMGGIGKTTVARVVFQKIKDQFDVSCFLDNVREISRETNGMLRLQTKLLSHLAIKGLEIIDLDEGKNTIINLLSEKKVLLILDDVDDTSQLDNLAKRVEWFGRGSRVIITTRDTQVLISHGVVENYNIEFLNSDESLQLLSQKAFKRDEPLEHYLELSKVVAKHAGGLPLALELLGSFLCGRSEFQWREVVDMIKEVSASHIVMKSLRISYNGLPRCHKALFLDIACFFKGRVKELATQTLEICDRYPAVGIELLVEKSLATYDGFTIGMHDLLQETAREIVIEESHVDAGKRSRLWSLEDTNQVLKYSRENESIEGIALNSPEKDEANWDPEAFSRMYNLRLLIISFPIKLARGLKCLCSSLKFLQWNDFSLETLPLGVQLDELVELKMYSSKIKNIWNGNQAFAKLKFIDLSYSEDLIQTPIVSGAPCLERMLLIGCINLVEVHPSVGQHKRLVVLCMKNCKNLQIMPRKLEMDSLEELILSGCSKVKKLPEFGKNMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGCSRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKELSFGGRKELAPNSQNLLLWISKFMRQPNLKESTMPPLSSLLALVSLDLSYCDLNDESFPSHLGSLSLLQDLDLSGNNFVNPPAQCIINLSMLQNLSFNDCPRLESLPVLPPNLQGLYANNCPKLKPFNLDEEMLWKIYETQSRMDPIEGPEVWFIIPGNEIPCWFDNQNCLAIDSSHHPYDKLGCDSVTSITVDVPKDCQLSKWWGIAVCLVLEPSNMEEEDSSRSYVRPTSTGNEEMCIYYWVCKAPDRDPDPKFPIASKFGHLVYKLNDPYIHIIFLSADHVYIQHYLSGEQIQLQLIFFVENCSKSCKATIKKCGCRVVCKEKIEEWRKHSDGLNISRLTEVNDDEEFRRELVVEEPTSPNTFSSTDKTAVNTALDCDNA* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2281 1177 Gene3D Ribonuclease Inhibitor 815 939 IPR032675 -
Gso2g2281 1177 SMART till_3 14 155 IPR000157 GO:0007165
Gso2g2281 1177 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Gso2g2281 1177 Gene3D - 11 182 IPR035897 -
Gso2g2281 1177 Pfam TIR domain 15 187 IPR000157 GO:0007165
Gso2g2281 1177 Gene3D - 349 434 IPR042197 -
Gso2g2281 1177 Gene3D - 183 343 IPR027417 -
Gso2g2281 1177 PRINTS Disease resistance protein signature 215 230 - -
Gso2g2281 1177 PRINTS Disease resistance protein signature 291 305 - -
Gso2g2281 1177 PRINTS Disease resistance protein signature 384 398 - -
Gso2g2281 1177 PRINTS Disease resistance protein signature 740 756 - -
Gso2g2281 1177 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Gso2g2281 1177 SUPERFAMILY L domain-like 489 919 - -
Gso2g2281 1177 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 722 - -
Gso2g2281 1177 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 720 981 - -
Gso2g2281 1177 Gene3D Ribonuclease Inhibitor 548 692 IPR032675 -
Gso2g2281 1177 Gene3D Ribonuclease Inhibitor 693 768 IPR032675 -
Gso2g2281 1177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 720 981 IPR044974 GO:0006952
Gso2g2281 1177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 722 IPR044974 GO:0006952
Gso2g2281 1177 Pfam NB-ARC domain 206 430 IPR002182 GO:0043531
Gso2g2281 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2281 Gso-Chr2 47451386 47457343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2281 15 809 WRKY Transcription Factor Family AT4G12020 32.936 4.91e-92 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2281 - - gmx:100799850 2312.72