Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2273 ATGCAAGTGGCGGCAGAACTCCAACGCGCCCATCACCACCACCAAAGGCACAAACAAGACACTCCCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCACCGCCGGAGACGACGACGGCGAGGATCTCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGAACCCGCCAACTTCTCCTTCCTCCAAACCCTCGGCCTCCGTTCCATCATATATCTGTGTCCTGAGCCGTATCCGGAGGCCAATATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTTTCAGTTTGGGATTGAGGGTCATAAGGAGCCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTGTTCTTGATGTCAGGAACCACCCAGTTATAATTCACTGTAAGCGTGGAAAGCACCGAACGGGTTGCTTAGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCTGTCTTTGATGAATACCAACGCTTTGCAGCTGCCAAAGCAAGAGTTTCAGATCAGAGGTTGGACTAA 567 0.5009 MQVAAELQRAHHHHQRHKQDTPMCRQIQLTISDHTTAGDDDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLFQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRLD* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2273 188 Pfam Tyrosine phosphatase family 47 186 IPR004861 -
Gso2g2273 188 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 188 IPR020422 GO:0006470|GO:0008138
Gso2g2273 188 Gene3D Protein tyrosine phosphatase superfamily 45 187 IPR029021 -
Gso2g2273 188 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Gso2g2273 188 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Gso2g2273 188 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Gso2g2273 188 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Gso2g2273 188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 187 IPR029021 -
Gso2g2273 188 CDD PFA-DSP_Siw14 45 186 - -
Gso2g2273 188 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 187 - -
Gso2g2273 188 MobiDBLite consensus disorder prediction 1 22 - -
Gso2g2273 188 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 12 187 - -
Gso2g2273 188 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2273 Gso-Chr2 47396250 47403463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2273 42 187 Protein tyrosine phosphatase (PTP) family AT4G03960 78.767 5.75e-88 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2273 K18045 - gmx:100814279 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0420 14 3960635 3967195 Gso2g2273 2 47396250 47403463 GST