Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2269 ATGCGCCGAGGGAGAACCGCCGCCGCCGCTGCCGCCGTTGTGGATCCCACGCCGGACCAGGCCAAGGAGACGACGCGGTTCCGTGGCGTGAGGAAGCGGCCGTGGGGGCGATTCGCGGCGGAGATTCGAGATCCGTGGAAGAAGCAGCGCGTTTGGCTGGGGACCTTCGATTCCGCCGAGGATGCCGCGCGGGCCTACGACAAGGCTGCCCGATCCTTCCGCGGGCCCAAGGCCAAAACCAATTTCCCCCCCTTCCCCGGCCCGGCAGAGGCGGACCACCACTCGCAGATTCCGCTCTACCAGGCCCATGGGCTTTCCACCAAGTTCGAGCCCGTCGTCCAGGTGAACCGGCCCACGAGCAGCGGCATGAGCAGCACCGTGGAGTCCTTCAGCGGGCCTAGGGTTCCCTCCTCCTCCTCTCGCGCTAAGCCCCTTGTTGTGGTTGTTAACCCTATCATCCCTCTCAACGACGACGAAGACGATTGCCACAGCGATTGCGACTCTTCTTCCTCCGTCGTCGACGACGGCCAGGACTGCGTCCTCATCTCCTCCTTCCGGCAACCGCTGCCCTTCGATCTAAACCTCCCACCATCCGATGCCGACGACGACAACGACGACGACCTGCCGGCCACCGCGCTGTGCCTCTGA 648 0.6543 MRRGRTAAAAAAVVDPTPDQAKETTRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDKAARSFRGPKAKTNFPPFPGPAEADHHSQIPLYQAHGLSTKFEPVVQVNRPTSSGMSSTVESFSGPRVPSSSSRAKPLVVVVNPIIPLNDDEDDCHSDCDSSSSVVDDGQDCVLISSFRQPLPFDLNLPPSDADDDNDDDLPATALCL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2269 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 8 194 - -
Gso2g2269 215 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Gso2g2269 215 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Gso2g2269 215 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 194 - -
Gso2g2269 215 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Gso2g2269 215 SUPERFAMILY DNA-binding domain 26 83 IPR016177 GO:0003677
Gso2g2269 215 MobiDBLite consensus disorder prediction 1 27 - -
Gso2g2269 215 MobiDBLite consensus disorder prediction 118 138 - -
Gso2g2269 215 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Gso2g2269 215 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Gso2g2269 215 MobiDBLite consensus disorder prediction 195 215 - -
Gso2g2269 215 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Gso2g2269 215 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2269 Gso-Chr2 47324479 47325655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2269 1 215 AP2-EREBP Transcription Factor Family AT1G50640 48.261 3.00e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso2g2269 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2269 K09286 - gmx:100812313 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0424 14 4047713 4048889 Gso2g2269 2 47324479 47325655 GST