Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2258 ATGGGTTTCACTGGGGAGTTGGTAAGAAGTGTCTTCTCCAAAAATCGTTCTGATGGGTCTCATGAAAACAAAGTGAGGCGCAATAGTGCTGAAAATAGAAGATGGTTATCTGTGAGGTCATACTTGTGTGGCGATGAATTCAACTCAGTGCTTGCAGAGAATGATTCAGCTTCAGTTAAGAGCTCTGAAGTCACGGTTTCACAGTCCGTAAATGAGGACTTGTTGAATGATAAAGGAGACACCAGTTGTGAAGAAACTGTGGAGAATGTAACACAGAACAGAACAGATTCAAACTCCAAAAAATCATTGAATGAGGAAGAAGCAGCTATTCTTATTCAATCAGCATTTAGAGGCTTCCTGTTGAGGCATCAAAATGGAGAAATCAAATCACAAACTCGAAAAGATGAGTTCAATTTAGCAACAGAAAGTCCAGACAGAAAGTCCATGGGCACATCAATTGAAGTCCAAACCGCAAACTCCACAGAAGTTTTCTCTTTTGAAGGAGAAAAAAAGGGCATTTGCCACCGTATTCAGCACAGGACCAGAACTCAAGCAATAAAACAAAAGGAAGATTGGGATGACAGCACAGTAAGTAGCTATGTTTCAAAAATGAGGATGCAGAATAGAATGGAGGCATCAACCAGAAGGGAAAGAGCATTGGCTTATGCTTTCTCACAACAGCTAAGAATCTGTTCAAAGAGAAGATCTCCAAAATTTGATAGAATGGAGTCAAATATGAGTTGGAGCTGGCTTGAACGATGGATGGCAACACGCCTTCCTGAGACCTCATCAGTTGAAAGCCATGCCATGAAGCAGTATGACCCTTCTAATGGTAGTCACAAATTCACAATCATGACAAGATTTTTGGATGCTGCTGGGGAAGAAAAGGAGAGCTGCGGGTCAAATGAAGTGCCCCTTCATTTTGATAACTATTCCATCAATTCACGAGAAGAAAAATTTAGCTTCAAACCACATACACCAAAGACCAACTTCAAAGCTAGGAGAACTGTTTCAAGGAGGAAAACAGTGCCAAGTTATCAATTCCATGAAGAGCAGCCAAAGGTAAGCAAGAGAGATGGTTCAGGCAATGCTAGCAAGGATATTAAGCAAAAACAAAAGCAAGTGGGAAACAGGGATGAAATTACATTAAGCACCTCGAAAGCTTCTAATGTGTAA 1176 0.4073 MGFTGELVRSVFSKNRSDGSHENKVRRNSAENRRWLSVRSYLCGDEFNSVLAENDSASVKSSEVTVSQSVNEDLLNDKGDTSCEETVENVTQNRTDSNSKKSLNEEEAAILIQSAFRGFLLRHQNGEIKSQTRKDEFNLATESPDRKSMGTSIEVQTANSTEVFSFEGEKKGICHRIQHRTRTQAIKQKEDWDDSTVSSYVSKMRMQNRMEASTRRERALAYAFSQQLRICSKRRSPKFDRMESNMSWSWLERWMATRLPETSSVESHAMKQYDPSNGSHKFTIMTRFLDAAGEEKESCGSNEVPLHFDNYSINSREEKFSFKPHTPKTNFKARRTVSRRKTVPSYQFHEEQPKVSKRDGSGNASKDIKQKQKQVGNRDEITLSTSKASNV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2258 391 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Gso2g2258 391 PANTHER IQ-DOMAIN 33 1 374 - -
Gso2g2258 391 MobiDBLite consensus disorder prediction 377 391 - -
Gso2g2258 391 Pfam IQ calmodulin-binding motif 107 123 IPR000048 GO:0005515
Gso2g2258 391 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
Gso2g2258 391 MobiDBLite consensus disorder prediction 344 376 - -
Gso2g2258 391 MobiDBLite consensus disorder prediction 335 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2258 Gso-Chr2 47229567 47233155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2258 1 355 IQD Protein Family AT5G35670 40.194 5.91e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2258 - - gmx:100807137 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0435 14 4149695 4153233 Gso2g2258 2 47229567 47233155 GST