Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2244 ATGGGAAGTTCCGTGCGTGTAAAAGAAGCATCTGTGGTTACACCTTCTGAGCCCACTCCATCGAGTGTGTTGGCTCTATCAGCTCTTGATTCGCAACTCTTCCTTCGTTTCACCATAGAGTATCTCTTGGTCTACAACCCTTGCCCTGGCCTGGACCAGGCTGCCACCACGGCCCGTTTAAAAGCAGCATTAGCCCAAGCACTGGTTCCCTACTACCCCTTCGCGGGCCGGGTCAGGACCAGACCCGATGGACCGGGCCTGGAGGTGGTTTGCGGAGCCCAAGGCGCGGTGTTCATAGAAGCCTCCGCTGACCGTTACAATGTTAACGACTTCGAGAAAGCGCCTAAAGCAGTTGCGCACTGGAGGTCGCTCTTGTCGCTCCACGTGGCAGACGTTCTCAAAGGATCGCCGCCGCTGGTCGTTCAGCTGACGTGGCTCGGCGACGGCGCCGCCGCAATCGGCGTGGGGATCAACCACTGCATCTGCGACGGGATTGGGAGCGCGGAGTTTCTAAACCACTTCGCCGAGTTAGCCAACGAGAAACGCGAGTTGTTATTATTAGCTCAGAGGCCCAAACATAAACCTATTTGGGAGCGTCACCTTCTGAAGCCAACGCGTGGGAAGCAGACGCGGGTAGACTCGGAGAGTCACCCCGAGTTCAACCGAGTCCCGGATTTATGCAACTTCATGAACAAAGTCTCGACGGGGCTTAAACCGACCTCGGTGACCTTCGACAAGAGGAGACTAAACGAGATGAAGAGACTCGCGAGTAGCACGAGTGAACCAGGCGAGACGGTGTGTTACACGTCGTTCGAGGTGCTGGCGGCGCACGTGTGGAGAAGCTGGGCGAGAGCAATAAGGTTTCCGCCGAATCAGAAGTTGAAGCTGGTGTTCAGTATAAACGTGAGGAACAGGGTTAAACCGGGTTTACCAGAGGGGTATTATGGGAATGCGTTTGTTTTGGGGTGTGCGGAGACGAGAGCGAAGGAGCTGGAGGAAAGAGGGATAGGGTTCGGGTCGGGTTTGGTGAAGCGGGCGAAGGAGAGGGTTGGGAATGAGCACGTGAGGGGCGTGATGGGGATGGTGTGGGAGAGAAAAGCGTGCCCTGACCCGGTTGGGGTGCTCATAGTGTCGCAGTGGTCCAGGCTGGGTTTGGAGAACATTGACCTGGGTATGGGCAAGCTTCTTCACGTCGGACCCGTGTGCTGCGATAGGTACTGCTTGTTTTTGCCGGTCAGAGATCAGTGTCTCAGTGTCAAGGTCATGCTGGCTGTTCCCACTCACGCCCTTCACAATTACCAGCTTTTTATGCGTAATAATTGA 1323 0.5571 MGSSVRVKEASVVTPSEPTPSSVLALSALDSQLFLRFTIEYLLVYNPCPGLDQAATTARLKAALAQALVPYYPFAGRVRTRPDGPGLEVVCGAQGAVFIEASADRYNVNDFEKAPKAVAHWRSLLSLHVADVLKGSPPLVVQLTWLGDGAAAIGVGINHCICDGIGSAEFLNHFAELANEKRELLLLAQRPKHKPIWERHLLKPTRGKQTRVDSESHPEFNRVPDLCNFMNKVSTGLKPTSVTFDKRRLNEMKRLASSTSEPGETVCYTSFEVLAAHVWRSWARAIRFPPNQKLKLVFSINVRNRVKPGLPEGYYGNAFVLGCAETRAKELEERGIGFGSGLVKRAKERVGNEHVRGVMGMVWERKACPDPVGVLIVSQWSRLGLENIDLGMGKLLHVGPVCCDRYCLFLPVRDQCLSVKVMLAVPTHALHNYQLFMRNN* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2244 440 Gene3D - 2 221 IPR023213 -
Gso2g2244 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 436 - -
Gso2g2244 440 Gene3D - 231 437 IPR023213 -
Gso2g2244 440 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 436 - -
Gso2g2244 440 Pfam Transferase family 4 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2244 Gso-Chr2 47119557 47121259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2244 5 423 Monolignol Biosynthesis Gene Families AT5G48930 26.667 2.17e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2244 - - gmx:100794022 884.404