Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2243 ATGAAGGGTTATTATGAGCCACGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTCTTGAAGAGAAGGTGCATACCCAATTGCATATTTGCACCGTACTTTCGCTCTGACGAGTGCAAGAAATTCGCCAAGGTGCACAAGGTGTTCGGGGCAAGCAATGTGAGCAAGATCCTCGTTGAGGTTCCTGAGGAACAGAGAGAGGACACGGTGAATTCACTTGCTTATGAGGCGGAAGCACGGCTTCGGGACCCGGTTTATGGATGCATTGGTGCCATAGCTCTGCTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGACCGTCTTGCTCGTTATGCTACTGCTGCTGCTACTGCTACCACCACCCCTTCTAATTCCACTTCTCATGATGCCTTCTTTAATGGCCACGTTAGTTTGCCACCCTTCCCTGATTTTTACACTTGTGCTGATAATTTCAATAATAATAATGACAACTTCTGCCACACCTCTTCTTCTCAATCATCATTGACCAGACATGAAACGGTGGATGATTTTATTCAAACCCCATATATATTTTGA 567 0.4586 MKGYYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYATAAATATTTPSNSTSHDAFFNGHVSLPPFPDFYTCADNFNNNNDNFCHTSSSQSSLTRHETVDDFIQTPYIF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2243 188 Coils Coil 91 111 - -
Gso2g2243 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 163 - -
Gso2g2243 188 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Gso2g2243 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 163 - -
Gso2g2243 188 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2243 Gso-Chr2 47112024 47112789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2243 1 156 AS2 family AT3G11090 61.538 2.92e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso2g2243 LOB 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2243 - - gmx:100803403 371.703