Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2229 ATGGGTGGAAATTCCCCTTGTGCCTCATGCAAATTGCTGAGGCGTCGGTGCACAAAAGACTGCATCTTCGCTCCTTATTTTCCTTCTGATGACCCCCAAAAGTTTGCTATAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGTTACAGGAACTTCCAGTTCACCAGAGAGCAGATGCAGTGAGCAGTCTAGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTGTATGGTTGTGTTGGAGCAATATCCTACTTGCAAAATCAAGTTTCTGAGCTTCAAATGCAGCTTGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGGAACATGAGCCAGTGATGCCAGCAGCCTCAGGAATTGATCTAGACTACAAGTCTTACTTTCTCCAAAATGACCTCTCTCAGTTTCTTGGCTTTGACACTTCTAGCAATGTAATGCAGCAATTTTGCCCATGA 465 0.4473 MGGNSPCASCKLLRRRCTKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMEHEPVMPAASGIDLDYKSYFLQNDLSQFLGFDTSSNVMQQFCP* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2229 154 Coils Coil 85 105 - -
Gso2g2229 154 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Gso2g2229 154 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Gso2g2229 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 145 - -
Gso2g2229 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2229 Gso-Chr2 46985356 46986364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2229 3 132 AS2 family AT2G30130 81.203 4.12e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso2g2229 LOB 3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2229 - - gmx:100799327 315.464