Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso2g2225 | ATGGCACACAGAAAAAGGCGTTTAGATCAACTCAAGCATCCATTCAGTCCTCACCCATTTGAAGCAGTTGCATTTGGCTCATGGCAAGCTGTGGAGTTCATAAAAATTGAGGCAGGAACTATGTCCATGCATTTTGCAGATAATCATCATGTGGTTATGGAGAAAGGACCCTTGTCAGATATTCGAATAAGGTCAAGGAAAGCTACTTTACCTGATTGCTCGCGTTTTCTTCGTCCTGGAATTGACGTATGTGTACTATCTGCCCCTCAACAATCTGATGATGCAGATGCAGGAATTAATCTCGACCCTGTTTGGACTGATGCCAAAATAAGCTCTGTACAAAGAAAACCTCATGACTCAGAGTGCTCGTGTCAGTTTTATGTCAACTTCTATGTTCATCAAGGTTCACTCGGTGCAGAGCTAAGAACTCTTAATAAGGAGATCAAAGTAGTTGGAATCAATCAAATATCCATCCTCCAAAAACTTGAAAGTACTCCTTGTGAAAATCAGCACTACCGGTGGGCATCATCCGAGGACTGTTCCATTATATCACACACTAAATTGCTTCTGGGAAAAGTGTTATGTGATCTTTCATGGTTAGTTGTTACCACAGCTTTAAAGAAGAAGGTTTCATTCTGCGTAAGATCTCTAGAAGACAAGCTGGTGTATCAAGTTTTGGAAAGGGATACTACTGTTAGCACTTCATTGAACAATGAGTCTCACATTGATGTTGTGAATTTCAAAACAGAAAAAGGCACGTTATTTTCCATTGTTTCTCAAGTAGCTACACTTAAAACTAAGAGGGTTGAACCTGAACAGGAATCCCATGAAGATAAAGAATCACCATCTTACAATGTTGAGGGCTTACGGCGTTCCAAGCGTCGGAATGTACAGCCTGAGCGTTACCTTGGCTGTGAAAAAGTTTCCCAGATTGATGTTGGTTCTTTCAGAAACTTACCACCAGTTAAGATAAACACTTGGAAAGATGATGATGTTGATCATGAAATGAATATACCATTAGCTGGCCTGTTTAGTTTGCAGAAGAAGTTTTTAGAAGGGGATACTGACAATCATCAAAAGGTCAAGAAGGCGAGCTCGTGCCGGGAGCTTGTGGTGTACCAAAGGAAGAAGACTAAATCCCAGAAAGTAAAGTCAGGAGGTGATGATCAGAATGAACATCAAAATCATCTTGCTATTATTGCTCTTCCTGCTCAACATGATCCGGTAGAAGTTATACATTGTGATGATCTAAATGACAAGGTTACTAGAAGTTATGGTCATGAATCCTCTGAAGTTTCTTCCAAGTATCGTCATCTAATCGGTACCACTTCAAAGAAGAACGATATTAAATTGTTAACTTTTGAGTCTCATAATCATGCTGCAAAGTCAGATGATGCAGACAAGATTGATGATTTGTCATCGAGATATCATTATAGTTATGGCACCCCTAAGTCACAGAGGATGGGTTTAAGTGATCTGGATGATATGGTGGATCTTGGAAATAAATGGGAAGGGATTAGTTCCAGTAAAGGATTTCAAGGGAAAAAACAGCGTACGACATATTTAAGAAGTAGAGATCATGGAGAACAAAAAAGATACAATTATAAAGACAGATCCTTAAATGCAGCTGCCTACAAGGATTTGATAAATTCGTACTTGAAGAATATGAATACAAGACCAACCAATGAAGAATCAGCTATTGCTGACCAATGGAAGCAAAGCGAAACACCAAGCAACATTGGGCAAAAGACGGAAACTCAGATGCTTGATGAAGAGGATGCAGAAGAAGAATCTGAAATGGATATGCTGTGGAGAGAACTGGAAGTGTCATTGGCATCATGTTATCTAGAAGAAGAGACAGAGGATTCACATGCTGCTGTTTTCACCGAGACTCTGGAAAATCCGAACCCAGGTTGTCCTCATGATTTCAGAATGAATGAAGAAATTGGAATTTACTGCTATAGATGTGGCTTTGTGAGCACTGAGATCAAATATATTACACCACCCTTTATTCAACATTCAGTGCGACACCAAGAGGAGAAGCAGAGCCCTGAAGAAGATTCGAAGACCAAGCCTGATGAGGACGATGACATAGATCTTTTGCCAGCTCTAGACTCTCCTGAGAAACTTGTATCTCAAGAAAATGAAAACGTTTGGGCGTTAATTCCCGAACTTAAAGCAAAGTTGCATGCCCACCAGAAGAAAGCATTTGAGTTTCTTTGGCAAAACATTGCAGGGTCCATGGACCCGGAATTGATGGAAACTGCATCCAAAAGAAGAGGTGGCTGTGTGATATCCCATACTCCTGGAGCAGGAAAAACTTTTCTCATTATTGCTTTTCTTGTTAGCTACTTGAAGTTATTCCCAGGGAAGAGGCCACTAGTCCTTGCTCCAAAGACAACACTCTATACTTGGTACAAGGAATTTATCAAGTGGGATATTCCTATACCAGTTTATCTGATTCATGGTCGTAGAACCTACCGTGTATTCAAGCAGAAATCGTCGATTGTTATTCCTGGAGTTCCTAAGCCCACTGATGATGTCAAGCATGTTTTGGATTGCCTTGAGAAGATACAAAAATGGCATTCGCACCCGAGTGTTCTTATCATGGGTTATACTTCCTTTTTAACATTGATGCGAGAGGATTCGAAGTTTGCACACAGGAAATATATGGCTAAGGTATTGAGGGAAAGCCCCGGGATCATGGTGCTGGATGAAGGGCACAATCCTAGAAGCACCAAATCTAGGTTGAGAAAAGTTTTAATGAAAGTGCAGACAGAACTGAGAATACTGCTTTCTGGTACATTGTTTCAGAACAATTTCTGCGAGTACTTCAACACTTTGTGCTTGGCAAGGCCAAAGTTTATTCATGAAGTACTGAAAGCATTGGACTCCAAATACAAGAGGAAAGGGAAAGTTGCAAAAAAAGCGAGTCATTTATTAGAGTCGCGGGCTAGAAAGTTCTTCTTAGACCAAATTGCCAAGAAAATTGACTCGAATAATGGTAGGGAGAGGCGGCAGGGTCTAAAGATGTTGAGAAATGTGACAAATGGTTTCATAGATGTGTATGAAGGTAGGAGTTCTGATGGTCTACCTGGTTTGCAAATTTATACATTACTGATGAATTCAACTGATACACAGCATGAGATTTTGCATGAACTGCACAAGAAAATGGCCAGAGTCAATGGATACCCTCTGGAGTTAGAGCTTTTGATAACTCTAGGTTCAATACATCCTTGGTTGGTGAAATCAGCAGTATGTGCTGAGAAATTTTTCACTCCTGCGCAATTGATGGAGCTAGAAAAATGCAAGTTTGATCTGAGAATAGGGTCCAAAGTAAAATTTGTTTTGAGCCTTATCTACCGGGTTGTCAAGAAGGAGAAGGTTCTCATATTTTGCCACAACATTGCACCTGTGAAGTTATTTGTGGAATATTTTGAGAAGTACTTTGGATGGACAAAAGGTAGGGAAGTGTTGGTGCTATCTGGGGAACTAGAGCTGTTTGAAAGGGGGAGAGTAATGGACAAGTTTGAGGAGCCTGGTGGAGTAGCAAAGATACTACTTGCTTCAATCACTGCTTGTGCTGAAGGCATTAGTTTAACAGCTGCTTCAAGAGTGATCATGTTGGACTCAGAGTGGAACCCTTCAAAAACAAAGCAAGCCATTGCCCGCGCCTTTCGCCCTGGTCAGCAGAAAGTTGTTTATGTTTATCAGCTGTTGGTGACAGGTTCATTGGAGGAAGATAAGTACAAAAGAACCACTTGGAAAGAGTGGGTTTCAAGCATGATCTTCAGTGAGGCCTTTGTGGAGGACCCTTCTCAGTGGCAAGCTGAGAAGATTGAAGATTATATACTCAGGGAAATGGTTGCGGAGGACCGGTCTAAATCGTTCCATATGATCATGAAGAATGAAAAAACTTCTACCAACAAATAA | 3933 | 0.4071 | MAHRKRRLDQLKHPFSPHPFEAVAFGSWQAVEFIKIEAGTMSMHFADNHHVVMEKGPLSDIRIRSRKATLPDCSRFLRPGIDVCVLSAPQQSDDADAGINLDPVWTDAKISSVQRKPHDSECSCQFYVNFYVHQGSLGAELRTLNKEIKVVGINQISILQKLESTPCENQHYRWASSEDCSIISHTKLLLGKVLCDLSWLVVTTALKKKVSFCVRSLEDKLVYQVLERDTTVSTSLNNESHIDVVNFKTEKGTLFSIVSQVATLKTKRVEPEQESHEDKESPSYNVEGLRRSKRRNVQPERYLGCEKVSQIDVGSFRNLPPVKINTWKDDDVDHEMNIPLAGLFSLQKKFLEGDTDNHQKVKKASSCRELVVYQRKKTKSQKVKSGGDDQNEHQNHLAIIALPAQHDPVEVIHCDDLNDKVTRSYGHESSEVSSKYRHLIGTTSKKNDIKLLTFESHNHAAKSDDADKIDDLSSRYHYSYGTPKSQRMGLSDLDDMVDLGNKWEGISSSKGFQGKKQRTTYLRSRDHGEQKRYNYKDRSLNAAAYKDLINSYLKNMNTRPTNEESAIADQWKQSETPSNIGQKTETQMLDEEDAEEESEMDMLWRELEVSLASCYLEEETEDSHAAVFTETLENPNPGCPHDFRMNEEIGIYCYRCGFVSTEIKYITPPFIQHSVRHQEEKQSPEEDSKTKPDEDDDIDLLPALDSPEKLVSQENENVWALIPELKAKLHAHQKKAFEFLWQNIAGSMDPELMETASKRRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWDIPIPVYLIHGRRTYRVFKQKSSIVIPGVPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKYMAKVLRESPGIMVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFIHEVLKALDSKYKRKGKVAKKASHLLESRARKFFLDQIAKKIDSNNGRERRQGLKMLRNVTNGFIDVYEGRSSDGLPGLQIYTLLMNSTDTQHEILHELHKKMARVNGYPLELELLITLGSIHPWLVKSAVCAEKFFTPAQLMELEKCKFDLRIGSKVKFVLSLIYRVVKKEKVLIFCHNIAPVKLFVEYFEKYFGWTKGREVLVLSGELELFERGRVMDKFEEPGGVAKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLVTGSLEEDKYKRTTWKEWVSSMIFSEAFVEDPSQWQAEKIEDYILREMVAEDRSKSFHMIMKNEKTSTNK* | 1311 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso2g2225 | 1310 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1116 | 1280 | IPR001650 | - | |
| Gso2g2225 | 1310 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 754 | 954 | IPR014001 | - | |
| Gso2g2225 | 1310 | SMART | helicmild6 | 1140 | 1229 | IPR001650 | - | |
| Gso2g2225 | 1310 | MobiDBLite | consensus disorder prediction | 268 | 291 | - | - | |
| Gso2g2225 | 1310 | Pfam | SNF2-related domain | 729 | 997 | IPR000330 | GO:0005524|GO:0140658 | |
| Gso2g2225 | 1310 | MobiDBLite | consensus disorder prediction | 674 | 697 | - | - | |
| Gso2g2225 | 1310 | Gene3D | - | 704 | 997 | IPR038718 | - | |
| Gso2g2225 | 1310 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1030 | 1288 | IPR027417 | - | |
| Gso2g2225 | 1310 | Pfam | Helicase conserved C-terminal domain | 1112 | 1228 | IPR001650 | - | |
| Gso2g2225 | 1310 | CDD | SF2_C_SNF | 1104 | 1240 | - | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information