Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2213 ATGAAGCTTGAAGAATCTGTGTCCAGCTCCAACATCATTGCCCGGCTGCTTCCACCGGAAGATCCGAATCCGCAAAATGGATCAATCTCCGGAGCGGTGTTCAACATAACAACCACCATGATCGGTGCCGGAATCATGTCCATTCCGGCGACCATGAAGGTTTTAGGCATAGTTCCGGGGTTGGTGGTGATCGTGTTGGTGGCACTGATAACAGATGTGACTGTGGAGTTTATGCTAAGGTACACAAGTTCCGGTAAATCCTCTACTTACGCTGGCATGATGGCAGAGTCCTTTGCCTCCATAGGATCCCTCGCCGTTAAGATTTGCGTCATCATATCCAATTTGGGGGTCCTCATCATCTATTTCATTATCCTTGGAGACGTGCTCTCTGGAAACGAGTCGAACGGAATCACACACTTGGGTATTCTACAAGAATGGTTTGGCATCAACTGGTGGACCTCTCGTGCTTTTGCTCTTCTTATTGTTGCACTCTTCATAATGCTTCCACTTGTTATGTTACGACGTGTTGATTCACTGAAGTATAGTTCTGCTATAGCAATCCTACTAGCATTTGTGTTTGTTGTAATATGTTCATCAATGGCGGTTAGTGCATTGTTGTCTGGAAAAACTCAAACACTAAGAATAGTGCCTGATTTCTCTCAAGCCACCGTCCTTGACCTTTTCACCACTATCCCAGTGTTTGTCACGGGTTTCGGATTCCATGTCAATGTTCATCCAATTAGAGCAGAGCTAGGAAAAGTTGCACACATGGGTTTGGCTGCACGGATTTCGTTGATAATCTGCGTGGCTATTTACTTTGCTATTGGTTTCTTTGGGTACCTTTTATTTGGGGACTCCATCATGCCCGATGTGTTGGTAAACTTTGACCAAAACTCCCATACAAGTGCTGGTCGATTACTCAATACCATTGTTCGGTTAAGTTATGCACTCCATCTTGCACTTGTGTTCCCAATCATGAACTATTCCTTGAGGGCCAACATAGATGAACTAATTTTCTCAAACAAAAATAAGCCTCCCCTTGCATCAGATACCCCAAGATTTGTGTCACTCACTTTGACTTTGCTAGCCCTCACATACTTTGTGGCTGTGGCCATCCCAAATATATGGTTTTTTTTTCAGTTCTTGGGATCCACAACCATTGTTTGCACCTCATTCATCTTCCCTGCCGCAATTGTTCTAAGGGACATGCATGGCATATCAAAGACAAAAGATCAAGTGATGGCAATAGTGGTGATTGTTTTGGCTGTAGGAACAAGCGGAATTGCTATATGGACCAACTTGAATGGTTCAGGGGCTGCTCAATGA 1326 0.4427 MKLEESVSSSNIIARLLPPEDPNPQNGSISGAVFNITTTMIGAGIMSIPATMKVLGIVPGLVVIVLVALITDVTVEFMLRYTSSGKSSTYAGMMAESFASIGSLAVKICVIISNLGVLIIYFIILGDVLSGNESNGITHLGILQEWFGINWWTSRAFALLIVALFIMLPLVMLRRVDSLKYSSAIAILLAFVFVVICSSMAVSALLSGKTQTLRIVPDFSQATVLDLFTTIPVFVTGFGFHVNVHPIRAELGKVAHMGLAARISLIICVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSHTSAGRLLNTIVRLSYALHLALVFPIMNYSLRANIDELIFSNKNKPPLASDTPRFVSLTLTLLALTYFVAVAIPNIWFFFQFLGSTTIVCTSFIFPAAIVLRDMHGISKTKDQVMAIVVIVLAVGTSGIAIWTNLNGSGAAQ* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2213 441 Pfam Transmembrane amino acid transporter protein 26 414 IPR013057 -
Gso2g2213 441 PANTHER AMINO ACID TRANSPORTER 23 438 - -
Gso2g2213 441 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 23 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2213 Gso-Chr2 46840539 46844099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2213 9 434 Amino Acid or Auxin Permease AAAP Family AT3G56200 53.488 7.02e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2213 - - gmx:100794031 824.313