Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2212 ATGTCGCCGGTGCCCGGAGCACACGCCCCTCTCCTCCCGGGATCCAAGTCCAAGGATGTTCCGCCGGCCACCGTGTCCGGCGCCGTGTTCAATGTCGCCACCAGCATAATCGGCGCCGGAATAATGTCTCTTCCGGCGACTCTCAAGGTCCTCGGAGTGATTCCGGCGTTGGTTCTGATTCTCGTGATTGCTTTTCTTGCAGAGCTATCCGTGGAGTTCCTCATGAGGTTCACACGTGCCGGCGAAACGACGACGTATGCCGGCGTCATGAGAGAAGCCTTTGGACCCTTGGGAGCAGTGGCAGCTCAAGTCGCTGTTGTAATCACCAATCTCGGGTGTTTAATTATGTACCTAATTATTATTGCGGATGTGTTTTCTGGGAATCAACGTGAAGGGGAAGTACATTTGGGTGTTTTGCAACAGTGGTTTGGGATTCACTGGTGGAGTTCTCGGGAATTTGCTCTGTTGGTTGTCTTGTTCTTAATTTTGCTTCCATTGGTCTTGTACCGTCGCGTAGAGTCGTTGAAGTTCAGTTCTGCAATATCAACTCTTCTTGCTGTGGCATTTGTTACAATATGTACCGTGTTAGCAATAGTTGCTATTGTTGAAGGAAGAACACAGTCCCCTAGACTGATTCCTTGTTTGGACCAACATACCTCTTTTTTTGATCTGTTTACTGCAGTGCCGGTCGTAGTCACAGCCTACACATTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGCCATCAGAAATGGCAACAGCGGTTCGAATAGCATTGCTGCTTTGTTGTGTCATTTACTTTTCAATAGGCCTATCTGGGTACCTCTTGTTTGGGGATTCAACACAGTCTGATATTCTCGTCAATTTTGACCAGAATGCTGGTTCTGCACTTGGTTCATTGCTCAATGTTTTAGTCCGTTTAAGCTATGCTTTTCATGTTATGTTGACTTTCCCTCTCCTCAACTTCTCCTTGAGAACCAACGTAGACGAATTCTTCTTCCCTAAGAAGTCTCCTCTAGCCACAGACAGCAAGAGATTTGTGAGTCTCACTCTAGTGCTGCTAGCCTTAAGCTACATTGCTGCTATTTTAGTCCCAGATATTTGGTACATCTTTCAGTTCATGGGATCAACATCTGCAGTGTGCCTTGCCTTTGTCTTCCCTGGTGCTATTGTTCTAAGGGATTCTTACGGTATATCAACAAGAAGGGACAAAATTATTGCACTGGTTATGGTTATACTAGCTGCGATAACAAGTGTGATTGCTATCTCCACCAACATATACAAAGCCTTCCAGTAG 1305 0.4613 MSPVPGAHAPLLPGSKSKDVPPATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPALVLILVIAFLAELSVEFLMRFTRAGETTTYAGVMREAFGPLGAVAAQVAVVITNLGCLIMYLIIIADVFSGNQREGEVHLGVLQQWFGIHWWSSREFALLVVLFLILLPLVLYRRVESLKFSSAISTLLAVAFVTICTVLAIVAIVEGRTQSPRLIPCLDQHTSFFDLFTAVPVVVTAYTFHFNVHPIGFELAKPSEMATAVRIALLLCCVIYFSIGLSGYLLFGDSTQSDILVNFDQNAGSALGSLLNVLVRLSYAFHVMLTFPLLNFSLRTNVDEFFFPKKSPLATDSKRFVSLTLVLLALSYIAAILVPDIWYIFQFMGSTSAVCLAFVFPGAIVLRDSYGISTRRDKIIALVMVILAAITSVIAISTNIYKAFQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2212 434 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 433 - -
Gso2g2212 434 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g2212 434 Pfam Transmembrane amino acid transporter protein 23 421 IPR013057 -
Gso2g2212 434 PANTHER AMINO ACID TRANSPORTER 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2212 Gso-Chr2 46835231 46838367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2212 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.122 9.79e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2212 - - gmx:100793508 793.497