Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2208 ATGGCTTCGTCTTGTTCTAGCTTTATGATCACTTTGGCCGTTTTGGTCCTTTTGTTGGGGACTAGTAGTGCCAATGCCAATCCAACACTTCACACAAACTTCTACTACAGTTCTTGCCCAAAACTCTTTGACACTGTGAAACGCACAGTGGAATCGGCCATATCAAAGGAGACCCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCACGATTGCTTTGTCAATGGGTGTGATGGGTCAATTCTACTTGATGACACATCAAGCTTCACCGGAGAGAAAAACGCAGGACCTAACAGGAACTCTGCCCGTGGTTTTGAAGTGATCGATCAAATTAAGTCAGCTGTGGAAAAAGTGTGTCCGGGTGTGGTCTCTTGCGCTGACATCCTTGCCATCGCTGCAAGAGACTCCGTTGAGATCCTTGGAGGCCCAACTTGGGATGTGAAACTTGGAAGAAGAGACTCCAGGACGGCAAGCCAATCTGCTGCCAACAATGACATCCCAAGACCCACTTCAAACCTCAACCAACTTATTTCCAGATTTAATGCTCTCGGACTTTCCACCAAAGACTTGGTCGCACTATCTGGGGGTCACACAATTGGACAAGCAAGGTGCACAACCTTTAGAGCCCGAATCTACAACGAGACCAACATAGATAGCTCTTTTGCTCGCATGAGACAATCTAGGTGTCCCCGAACCTCAGGGTCAGGGGACAACAACCTAGCACCCATTGACTTCGCCACTCCCAGGTTCTTTGACAACCACTACTTCAAGAACCTCATTCAGAAGAAGGGCCTCATCCATTCCGACCAACAACTCTTCAATGGTGGTTCCACTGACTCCATAGTGCGTACCTACAGCACCAACCCGGCCTCCTTTTTCGCCGATTTCTCCGCCGCCATGATCCGGATGGGAGACATTAGTCCCCTCACCGGCTCCCGCGGAGAAATAAGAGAGAACTGCCGGAGGGTCAACTAA 975 0.4954 MASSCSSFMITLAVLVLLLGTSSANANPTLHTNFYYSSCPKLFDTVKRTVESAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNRNSARGFEVIDQIKSAVEKVCPGVVSCADILAIAARDSVEILGGPTWDVKLGRRDSRTASQSAANNDIPRPTSNLNQLISRFNALGLSTKDLVALSGGHTIGQARCTTFRARIYNETNIDSSFARMRQSRCPRTSGSGDNNLAPIDFATPRFFDNHYFKNLIQKKGLIHSDQQLFNGGSTDSIVRTYSTNPASFFADFSAAMIRMGDISPLTGSRGEIRENCRRVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2208 324 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PANTHER PEROXIDASE 11 323 - -
Gso2g2208 324 CDD secretory_peroxidase 30 323 IPR033905 GO:0004601|GO:0042744
Gso2g2208 324 Gene3D Peroxidase, domain 2 167 303 - -
Gso2g2208 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Gso2g2208 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Gso2g2208 324 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PANTHER PEROXIDASE 72-RELATED 11 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g2208 324 Gene3D - 33 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2208 Gso-Chr2 46782989 46785305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2208 30 324 Peroxidase AT5G05340 74.915 1.50e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2208 K00430 - gmx:100791414 647.506