Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2190 ATGGCTGTGTCCAACGGCGTCGAAGCTGTGTTAGAGTTTCTAAGGAAGAATGGATTGTCGGAAGCTGAGTCCGCTCTCCGAGAAGACATCATCGAGAACACCGACCTCGGAACCTTTGACTACGAGAAGTTCTTCTTCCCCATGGTCCCGCCGCCGCCGCCGGTCAGAGTCCGATCTTTCTCCCGGCCGTCGGAGCTCTCCGCCGCCGGCAACTGCTCCATATCCAGCTCCGATGAGTTCGTCAGCATCGGTGGTTCTCCCACTTCTCGTGTTTCTTCTTCAGAATTCATAAATCCATATGGAATCCATTCCTCGTCTCAGACTCAGAATGACTCTGAATCTTCTTCGTCTGAAAGATTATCTCAATTTGGCACTGCACGTGATTATCACGATTTTGATATGCAGAATGAACCGTATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCGGACTTCTTTGCGTGTCAAAGTGAAGATAAGTTTGTCATGACAGCAGAAAAGGATAATCAACATGACAATTCTCGGGACCTTGATTACAATCATAAAGAATTTCAATCAGAGGAAAATAGTAATGGTGGTTTCATGGACAAGGCATGCCTTTATAATAGTAATCCTTCCTCTGTGGAAGATGGAACTGTGACATATTCAAAAGGGTATTGTCATGTTGATAACAACAACCAGTTTGAAGGAGAATTAGAGGGCAAGGTTGAGAAACAAACTGTTGCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGCAGTTTGGATCCTACAAACTTCGGCTACCCTAATTTGAAGGAAATCCATCTGAATGGTTTTCCTTTGAAGGTTGTTGGGGACATTAACTCTTTTGACTCTACTTCAGAGCTAACTGTGAATCAAAGTTTCGATTACTACACTAAAAATGACAGCAGTAAGGAGTACAATGGTCCCTATGACTTAACTATCAAAGTTACTGAAAAAGATCTACCAAATGGACTTGACACCTATAAAGCACGAGATGGTGGAGAATTAGCTGAAGAGTGCCTGGATCCAGAGATTACTGCAGATGGAGAGGATACTACTGATGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATATGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAATATCTTGGGTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATTTTTGCTTAAAGATTATTAAAAATGATAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGACCCAGCAGATAAACACCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTGTACGAATTTCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTGAACAGATTGCAGCTCATTACTCGCCAATGTTTGGAAGCATTGCAATACTTACATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAGAAGATGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTCCAAACAGACAATCTGTGTCTATATGTACAATCCCGGTCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATCTATGGTCTCTAGGCTGTATCTTGGCAGAGCTATGCTCCGGTGAAGTGCTGTTTCCAAATGATGCAGTTGTGATGATTCTGGCACGCATGATTGGAATGCTTGGCTCTATTGATATGGAGATGTTGGTGAAAGGGCAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAACTGGAGTACATAATTCCAGAAGAGTCATCATTGGAGCAGCACCTACAGGTCACTGATACTATGTTTATCGACTTCGTCAGATACTTACTTAGCATCAACCCGAAAAGAAGGCCTAGTGCGAGACAAGCACTAAGGCATCCATGGCTTTCCTATGTTTACTAG 2169 0.4117 MAVSNGVEAVLEFLRKNGLSEAESALREDIIENTDLGTFDYEKFFFPMVPPPPPVRVRSFSRPSELSAAGNCSISSSDEFVSIGGSPTSRVSSSEFINPYGIHSSSQTQNDSESSSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAEKDNQHDNSRDLDYNHKEFQSEENSNGGFMDKACLYNSNPSSVEDGTVTYSKGYCHVDNNNQFEGELEGKVEKQTVACSCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNGFPLKVVGDINSFDSTSELTVNQSFDYYTKNDSSKEYNGPYDLTIKVTEKDLPNGLDTYKARDGGELAEECLDPEITADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDFCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHSLGIVHCDLKPENILIKSYRRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDLWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGSIDMEMLVKGQETHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVTDTMFIDFVRYLLSINPKRRPSARQALRHPWLSYVY* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2190 722 Gene3D Phosphorylase Kinase; domain 1 411 497 - -
Gso2g2190 722 SUPERFAMILY Protein kinase-like (PK-like) 405 719 IPR011009 -
Gso2g2190 722 Gene3D Transferase(Phosphotransferase) domain 1 470 718 - -
Gso2g2190 722 Pfam Protein kinase domain 418 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2190 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Gso2g2190 722 ProSiteProfiles Protein kinase domain profile. 416 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2190 722 SMART serkin_6 416 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2190 722 CDD PKc_DYRK_like 416 718 - -
Gso2g2190 722 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 722 - -
Gso2g2190 722 MobiDBLite consensus disorder prediction 94 122 - -
Gso2g2190 722 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2190 Gso-Chr2 46574231 46579126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2190 413 713 MAP Kinase Gene Family AT5G19010 31.153 1.48e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gso2g2190 Pkinase 3.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2190 - - gmx:100783988 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0499 14 4781480 4786049 Gso2g2190 2 46574231 46579126 GST