Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2174 ATGGCGGGGAAAGTGGCGAAGGCAGCTTATGATGCAAAGATGCTGAAGCTTCTTAGAGAGTACAGTCAGGTGCTAGTGGTTTCATCAGACAATGTGGGTTCCAATCAGCTTCAGGGCATACGGAGGGGACTTAATGCTGACTCAGTGGTGGTTATGGGAAAGAACTCGATGATGAAACGCTCGATCATCTTGGATGCTAAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCATTAATTTTCACCAAAGGTGACTTGAGGGAAGTTAGCGAACAGATTGCCAAGTACAAGGTTGTTCAACCTATTCTCATGTGCCCTAAGTACACGTCATATGACACATACCAGAATTGTACCTATATGCAATCTGGACAGTTACCTTTGGGCCTCACGTGTTGTAATCAGCAATCTGCGCAGGCTTCTGAGCCTTTTCTTGTATGCTCAAAATTCTTGCCGCACCAACATTGTTTCTTGATGAGATCAAGACAGTTCTTGATGACGAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGTAACTTGTGA 564 0.4539 MAGKVAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKRSIILDAKKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYDTYQNCTYMQSGQLPLGLTCCNQQSAQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPLLLLAGNL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2174 187 Gene3D - 3 129 IPR043141 -
Gso2g2174 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
Gso2g2174 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 186 - -
Gso2g2174 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 186 - -
Gso2g2174 187 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2174 Gso-Chr2 46410753 46414668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2174 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 50.000 1.01e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2174 K02941 - mnt:21409050 158.303