Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2157 ATGGAATGGGCCTTGCAGAAAAACCCTAGCTGGCCCGCTCCGTTTGACTCTGTCTATAAGAATCCCGAAACTGATATTACTACTCCTTCCGCCGAGCTTAGTAGAAGAGAAAAGGAGGAGCAGGAGGCATCACCGTTACCAAACATGGTGAAAGGGCGCCAAGGAGAGCGTGTTAGACTTTACGTCAGGGGTTCAATACTTGGATACAAGAGGTCCAAGTCAAATCAATACCCAAACACCTCATTAATCCAGATTGAGAATGTAAACACTAAGGAAGAAGTTGCGTGGTACTGTGGGAAGCGTATGGCTTACATTTACAAAGCCAAGGTAAAGAAGGACGGAAGCCACTATCGCTGCATTTGGGGTAAGGTCACCAGGCCTCATGGTAACAGTGGTATAGTTCGTGCTAAGTTCAAGTCCAATCTGCCGCCCAGATCAATGGGAGCAAGGGTTAGAGTCTTCATGTATCCAAGCAATATATGA 483 0.4658 MEWALQKNPSWPAPFDSVYKNPETDITTPSAELSRREKEEQEASPLPNMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIENVNTKEEVAWYCGKRMAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2157 160 SUPERFAMILY Translation proteins 60 154 IPR009000 -
Gso2g2157 160 PANTHER - 49 160 - -
Gso2g2157 160 ProSitePatterns Ribosomal protein L35Ae signature. 122 143 IPR018266 GO:0003735|GO:0005840|GO:0006412
Gso2g2157 160 MobiDBLite consensus disorder prediction 1 48 - -
Gso2g2157 160 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 62 154 IPR001780 GO:0003735|GO:0005840|GO:0006412
Gso2g2157 160 Pfam Ribosomal protein L35Ae 60 154 IPR001780 GO:0003735|GO:0005840|GO:0006412
Gso2g2157 160 PANTHER 60S RIBOSOMAL PROTEIN L35A 49 160 IPR001780 GO:0003735|GO:0005840|GO:0006412
Gso2g2157 160 Gene3D translation elongation factor selb, chain A, domain 4 54 160 IPR038661 -
Gso2g2157 160 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2157 Gso-Chr2 46240172 46243128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2157 49 160 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 88.393 5.35e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2157 K02917 - gmx:100305997 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0536 14 5119034 5121664 Gso2g2157 2 46240172 46243128 GST