Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2141 ATGAGCACACAGGGGCAAGTGATTATTGATGAGGCGGTTCTGGATGACATAATCCGGCGCTTAACGGAGGTCCGACTGGCCCGACCCGGCAAGCAGGTTCAGCTCTCCGAGTCTGAGATCAAGCAACTCTGCGTCGCTTCCAGAGACATCTTCATTAACCAGCCCAATTTGCTTGAACTCGAAGCCCCCATCAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGTTTGCCTCCTACTGCGAATTATCTCTTTTTGGGGGACTACGTGGACCGTGGGAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTGCGTATAAAATCAAATATCCAGAAAACTTTTTCCTGTTAAGGGGGAATCATGAGTGTGCTTCCATTAATAGGATTTATGGGTTTTATGATGAATGTAAGCGAAGGTTTAACGTGAGGCTTTGGAAAGCCTTTACCGACTGTTTTAACTTCCTTCCTGTGGCAGCCCTTATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGAACTCACAAACTTGGATGAAATCAGGAATCTACCTCGTCCTACTGCGATTCCCGACACCGGCTTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGGGATGTGAAGGGTTGGGGTATGAATGACAGAGGAGTGTCCTACACCTTTGGCCCTGATAAGGTCGCTGAGTTCTTGACAAAGCATGACTTGGACCTCATTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCTGATAGGCAACTTGTTACGATATTTTCAGCTCCAAACTATTGTGGTGAATTTGACAATGCTGGTGCGATGATGAGTGTGGACGAAAACTTGATGTGCTCATTTCAGATTCTTAAGCCTGCAGAGAAAAAATCAAAGTTTGTGATGTCAAACAAGATGTGA 951 0.4501 MSTQGQVIIDEAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASRDIFINQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNFLPVAALIDDKILCMHGGLSPELTNLDEIRNLPRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKSKFVMSNKM* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2141 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Gso2g2141 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Gso2g2141 316 Gene3D - 5 314 IPR029052 -
Gso2g2141 316 SUPERFAMILY Metallo-dependent phosphatases 23 309 IPR029052 -
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Gso2g2141 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Gso2g2141 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Gso2g2141 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Gso2g2141 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 7 309 - -
Gso2g2141 316 CDD MPP_PP1_PPKL 13 303 - -
Gso2g2141 316 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2141 Gso-Chr2 46045354 46049031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2141 64 248 Calmodulin-binding Proteins AT5G63870 33.032 2.46e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2141 K06269 - gmx:100811593 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0557 14 5349995 5353911 Gso2g2141 2 46045354 46049031 GST