Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2129 ATGGCTGGAATTTGCTGTGGAGTTGTTGGAGAATCCGGAGAGACTTCTTCCTCTTCAATCGAACCCACCTCGCGCCCCTCCGCTCGCCGGAGTTTGGACCTTTTGCCTTTGAGATACATAGCTGCTGACGTGTCAGTCCCGGCGCCGGAGAACAGCCGGAAGCGCCAGAAGCTGGATCGGTGCGTTTCTTCCGCAAGGGAGTGCGAAAACGCGGTTCAGAGTTCCAAATCGAAGGTAGCTAAGGCTGTTCGGAATCGTTCTTCCAAGATTCTTACGTTGGACTCGACAAGTCCAACAGTTTACGAGGGGTGTCTGAGGTATGGGGTAACGTCCGTTTGTGGAAGGCGGAGAGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAGGAAAATTTATCTCAAGATGATAAGAAAGAGTTTCATTTCTTCGCTGTCTTCGACGGCCACGGATGCTCACATGTGGCGACTATGTGTAAGGAGAGGTTACACGAAATAGTGAAGGAAGAGATTCACAAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAGAAGTGTTTCGCGCGCATGGACGAAGAGGTTCTCAGGTGGAGCCAGAACAACGAGACTCCAAATTGCAGGTGCGAGCTTCAAACCCCGCACTGCGACGCCGTAGGCTCCACCGCTGTCGTCGCCGTCGTCACGCCAGAGAAAATCATCGTCGCCAACTGCGGCGATTCACGCGCCGTGCTTTGTCGCAACAAGGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGGCCCGACGAGTTGCTTCGGATCCAAGCCGCGGGAGGGCGCGTGATATATTGGGACCGGCCTAGAGTGCTTGGAGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATCTGAAACCGTATGTAATTTCGGAACCGGAGGTAACGGTAACGGAGCGGAGTGACAAGGATGAGTGTTTGATACTAGGGAGCGATGGGCTTTGGGACACGGTGCAGAACGACACCGCATGTAAGGTGGTGCGGATGTGTCTGAACGCGCAGAAGCCGGCGTCTCCGGTGAAGGAGATGGCGGTGGACTGCTCCGACAAGTCGTGCTCCGACGCCTCCATTCTTCTGACCAAATTGGCGTTGGTGAGGCAAAGCTCCGACAATGTTAGCGTGGTGGTGGTTGATTTGTGGAGAGACCAATCAATGGCAACAACAAAAGGAATTAATTAA 1224 0.5376 MAGICCGVVGESGETSSSSIEPTSRPSARRSLDLLPLRYIAADVSVPAPENSRKRQKLDRCVSSARECENAVQSSKSKVAKAVRNRSSKILTLDSTSPTVYEGCLRYGVTSVCGRRRDMEDAVSVRPSFCQENLSQDDKKEFHFFAVFDGHGCSHVATMCKERLHEIVKEEIHKAKENLEWESTMKKCFARMDEEVLRWSQNNETPNCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNKVAVPLSDDHKPDRPDELLRIQAAGGRVIYWDRPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDKDECLILGSDGLWDTVQNDTACKVVRMCLNAQKPASPVKEMAVDCSDKSCSDASILLTKLALVRQSSDNVSVVVVDLWRDQSMATTKGIN* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2129 407 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Gso2g2129 407 MobiDBLite consensus disorder prediction 9 28 - -
Gso2g2129 407 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 25 399 - -
Gso2g2129 407 SUPERFAMILY PP2C-like 97 394 IPR036457 -
Gso2g2129 407 MobiDBLite consensus disorder prediction 11 26 - -
Gso2g2129 407 SMART PP2C_4 96 392 IPR001932 -
Gso2g2129 407 Pfam Protein phosphatase 2C 106 370 IPR001932 -
Gso2g2129 407 PANTHER ALPHABET, ISOFORM E-RELATED 25 399 - -
Gso2g2129 407 SMART PP2C_SIG_2 126 394 IPR001932 -
Gso2g2129 407 ProSiteProfiles PPM-type phosphatase domain profile. 106 394 IPR001932 -
Gso2g2129 407 CDD PP2Cc 106 369 IPR001932 -
Gso2g2129 407 Gene3D - 95 401 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2129 Gso-Chr2 45946091 45948189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2129 1 382 PP2C-type Phosphatase Gene Family AT3G11410 57.468 2.17e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2129 K14497 - gmx:100807302 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0569 14 5459152 5461460 Gso2g2129 2 45946091 45948189 GST
Gso18g0307 18 2802884 2804863 Gso2g2129 2 45946091 45948189 PCT
Gso13g1313 13 28548964 28550956 Gso2g2129 2 45946091 45948189 PCT
Gso2g2129 2 45946091 45948189 Gso18g0307 18 2802884 2804863 PCT
Gso2g2129 2 45946091 45948189 Gso13g1313 13 28548964 28550956 PCT