Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2128 ATGGAGAGATCTCACTCTCAGACTCAGTACAGGATGTATGTGAAGAGAGAACAGCACTCACACCTTGGAGATTACTCATCGTGGGAAGAAAGGGCTTTTGCTGAAGACGCAGCAAGGATACTTGGTGGGAACATGTGGCCTCAAAGATCTTACTCTTGCACCTTTTGCACAAGAGACTTCAAATCTGCTCAAGCCCTTGGGGGTCACATGAATATCCACCAAAGGGACAGGGCTAGGCTCAAACAACAAAATCATCTTAGCCCTCATCACAAAAATCATCATTTCATCATCAAATCCTTATTAGGTAATAATAAACTTCATTTCTCATCTGCACCAGAAATCTCCACCCAGTTAGATTGTGGTCTTACTCATCATGCTTGTTATTCTTCTAGCCCTGCAACTACAATCACAACAACCAGACTCTTCTCTTGTATATCATCCACACAAGATCAAAATTGTGGCCACCATAATTTTTCACCTTCTTCTTCTAATTCTTGTTCTTCTTCAATTATCTTGGGACACGTAGGGTCTCCTAATTCAGAACAAGAAGGGGTAGTCAAAGCAAGGGACTATAAATTTAATGGCTTGGGTTGTAGTAATTATGTTGAAACAAGTTTGTCTGTTGGACTGACTTCAATGTTTGGCCAAAATTCATCATCACCAACAACCGTTCCTTGTGGGGACAGATCCAACAACAGTTGCAAGAGACTAAGGAGTAGCATTGTTTCTTCTCTGCCTCTCTTTCCCAAGCCATGTTCAAATGATAAAAGCTCGGCTTTTCAACCTGTGGTACATGGAACGGTTGAAGACTTGGATCTTGAACTCAGGCTAGGGAAACGTAACAGAAACTTAAGTAGTTAA 861 0.4135 MERSHSQTQYRMYVKREQHSHLGDYSSWEERAFAEDAARILGGNMWPQRSYSCTFCTRDFKSAQALGGHMNIHQRDRARLKQQNHLSPHHKNHHFIIKSLLGNNKLHFSSAPEISTQLDCGLTHHACYSSSPATTITTTRLFSCISSTQDQNCGHHNFSPSSSNSCSSSIILGHVGSPNSEQEGVVKARDYKFNGLGCSNYVETSLSVGLTSMFGQNSSSPTTVPCGDRSNNSCKRLRSSIVSSLPLFPKPCSNDKSSAFQPVVHGTVEDLDLELRLGKRNRNLSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2128 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Gso2g2128 286 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 284 - -
Gso2g2128 286 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Gso2g2128 286 PANTHER OS07G0101800 PROTEIN 4 284 - -
Gso2g2128 286 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Gso2g2128 286 Gene3D Classic Zinc Finger 44 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2128 Gso-Chr2 45928767 45929627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2128 26 129 C2H2 Transcription Factor Family AT2G37740 49.524 4.82e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso2g2128 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2128 - - gmx:102662367 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0570 14 5471517 5472710 Gso2g2128 2 45928767 45929627 GST
Gso18g0316 18 2889707 2891036 Gso2g2128 2 45928767 45929627 PCT
Gso13g1303 13 28434226 28435381 Gso2g2128 2 45928767 45929627 PCT