Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2126 ATGGCAAATCGTTGGTGGGCAGGTAACGTGCCGGTGAGGCCCAATGAACAAGACGACGGTGACAACAACCCTACTCCGACCAACAGTGGGAACAGTAACACCAACGTTAACGCGGTTACTGAGGACGATGCCAACACAAACGACGGCGAGGATCAGAATCTAAGTGCCGGGCGGCGGCCGCGTGGCAGGCCACCCGGGTCGAGAAACAAGCCGAAGCCACCAGTGGTGGTAACCAAGGAGAGTCCCAACGCGCTCCACAGCCACATCCTCGAAATCAGCGGTGGCAGCGACGTGGCGGAGTGCATTGCCACCTTCGCCACGCGCCGCCACCGCGGTGTCTCGGTCCTCAGCGGCAGTGGCGTAGTTACCAACGTCACGCTCCGGCAGCCGGCAGCCCCGGGAGGAGTCATCACCCTCCAGGGGAGGTTTGAGATTCTCTCCCTCTCCGGTGCGTTTCTGCCGGCGCCGTCGCCGCCGGAAGCCACCGGACTCACCGTGTACCTCGCCGGGGGGGAGGGACAGGTAGTCGGTGGAAGCGTGGTGGGGCCCCTTGTCGCCTCGGGGCCCGTGATGGTTGTTGCTGCTACTTTCGCTAATGCCACCTATGAAAGGTTGCCTTTGGAGGATGAACAAGGTGAAGAGGACATGCCAGATGTGAATGAAGGTGGGGGTGGTGTAGGAACACCACCACCACCTTCACAAGGTGAACAACAACAGGTTTCAATGCCGCTGTATAATTTGGTGCCTAGTAATGGTGATGGGTTTTGGGGGCCTCCACCTCGCCCTCCACCTCCACCTTCTAATTATTAA 810 0.5988 MANRWWAGNVPVRPNEQDDGDNNPTPTNSGNSNTNVNAVTEDDANTNDGEDQNLSAGRRPRGRPPGSRNKPKPPVVVTKESPNALHSHILEISGGSDVAECIATFATRRHRGVSVLSGSGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGEGQVVGGSVVGPLVASGPVMVVAATFANATYERLPLEDEQGEEDMPDVNEGGGGVGTPPPPSQGEQQQVSMPLYNLVPSNGDGFWGPPPRPPPPPSNY* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2126 269 ProSiteProfiles PPC domain profile profile. 82 220 IPR005175 -
Gso2g2126 269 MobiDBLite consensus disorder prediction 231 246 - -
Gso2g2126 269 MobiDBLite consensus disorder prediction 16 53 - -
Gso2g2126 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 269 IPR014476 GO:0003680
Gso2g2126 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 6 269 - -
Gso2g2126 269 Gene3D - 86 215 - -
Gso2g2126 269 CDD DUF296 88 169 IPR005175 -
Gso2g2126 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 210 - -
Gso2g2126 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 198 IPR005175 -
Gso2g2126 269 MobiDBLite consensus disorder prediction 255 269 - -
Gso2g2126 269 MobiDBLite consensus disorder prediction 1 82 - -
Gso2g2126 269 MobiDBLite consensus disorder prediction 204 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2126 Gso-Chr2 45900999 45902915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2126 58 223 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 72.289 1.45e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2126 - - gmx:100811243 371.318