Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2123 ATGGCTTCAAACTCCCACAACAATAACAAGGAAATTTTTTCCTCTTGGACACGCATGCAGAACAAGCAATTCGAAAGCGCACTTGCCTTGTATGATCAAGACACCCCAGATCGATGGCAAAACATAGCAAAAGTGGTTGGTGATAAATCGGCTGAGGAAGTGAAGAGACACTATGAAATCCTTTTGGAGGACCTTAGGCATATAGAGTCTGGACGTGTTCCAATTCCCAGCTATAAGTCCACAGATAATAATCAAGAGAGGCCTCTCAAGTGTCTTAATCAGCATTGA 288 0.4271 MASNSHNNNKEIFSSWTRMQNKQFESALALYDQDTPDRWQNIAKVVGDKSAEEVKRHYEILLEDLRHIESGRVPIPSYKSTDNNQERPLKCLNQH* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2123 95 CDD SANT 15 62 IPR001005 -
Gso2g2123 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Gso2g2123 95 Gene3D - 10 75 - -
Gso2g2123 95 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Gso2g2123 95 SMART sant 12 64 IPR001005 -
Gso2g2123 95 MobiDBLite consensus disorder prediction 73 95 - -
Gso2g2123 95 ProSiteProfiles Myb-like domain profile. 14 62 IPR001005 -
Gso2g2123 95 SUPERFAMILY Homeodomain-like 15 68 IPR009057 -
Gso2g2123 95 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2123 Gso-Chr2 45857846 45860446 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso2g2123 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2123 - - gmx:100808556 199.519