Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2112 ATGGCAATTGGGTTCATGGAGGTGCAGCTTGTGAAAGCAAAGGGTCTTCAAGAAACAGATATCTTTGCTCATATGGACCCGTATGTACTGTTACAATACAAAGGTCAAGAGCGCAAGAGCAGTGTAATTCATGAGGGCGGCAGAAATCCCATATGGAATGAGAAATTTGTATTCAGAGTGGAATACCCTGGATCAGGTGATCAATACAAGCTCAACCTTAGAATCATGGACAAGGATGTATTTTCTGCAGATGACTTTGTCGGCCAGGCTACAATCTATGTGAAGGATTTATTGGCGGAAGGAGCAGAGAACGGATCAGCTGAGCTTCGTCCTCACAAGTATAGTGTGGTTCGAGCTGACCAGTCTTATTGTGGCGAAATTGAAGTCGGTATAACTTTCACCCGAAAGGAAGAGGAATACATTGAAGATGATGTTGGAGGATGGAAGGAAAGTTGCTTTTAG 462 0.4351 MAIGFMEVQLVKAKGLQETDIFAHMDPYVLLQYKGQERKSSVIHEGGRNPIWNEKFVFRVEYPGSGDQYKLNLRIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAELRPHKYSVVRADQSYCGEIEVGITFTRKEEEYIEDDVGGWKESCF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2112 153 Gene3D C2 domain 2 135 IPR035892 -
Gso2g2112 153 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Gso2g2112 153 PANTHER INGRESSION PROTEIN FIC1 1 153 - -
Gso2g2112 153 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Gso2g2112 153 PANTHER 16 KDA PHLOEM PROTEIN 1 1 153 - -
Gso2g2112 153 Pfam C2 domain 6 105 IPR000008 -
Gso2g2112 153 SMART C2_3c 5 106 IPR000008 -
Gso2g2112 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2112 Gso-Chr2 45711573 45714435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2112 3 145 C2H2 Transcription Factor Family AT4G21160 26.573 4.24e-13 63.5