Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g2111 | ATGCGTCGGAACAGCCCTGCATACTACAGTCCTCCGCGGCGAGGATACGGCGGTGGTGGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTCCGGCAGGAGGGGGTTCGGTGGAGGCAGGCGCAGGGACAGCAATGGGAGCCTCTTGGTTCGTAACATTCCCCTCGATTGCAGACCCGAGGAGCTTCGCGTCCCTTTCGAGCGATTTGGACCTGTTCGTGACGTTTACATACCCAAGGATTATTACTCTGGAGAACCTCGAGGCTTTGCCTTTGTGCAGTTTGTGGATCCTTATGATGCCTCAGAGGCACAGTACCATATGAACAGACAGATTTTTGCTGGAAGGGAAATATCTGTAGTTGTGGCTGAAGAGACGAGAAAAAGACCAGAGGAGATGCGCCACAGGACTAGTAGGTTAAGAGGACCAGCGGGCTATGGAGGGCAAAGGTCTTCTCGTTACGGGCGTTCTCGATCTCGCTCAGTTACCAGATCACGCTCACCACCTTATCACTCTGGTTCTAGGAATCGATATCGCTCAAGGTCCTATTCGCCTGCTCCAAGACGGCAAAGTGATTACTCTGTTTCCCCTAGGAGGCAAGCTGAGCACCCCAGATCACCAAGAGGTCCTCCCAGGGAGAGGGATGGTGAACAGAAGCGTAGGTCTTATTCTCCTGCTTATGGCAATGGTATTGAACAGAATCAAAGCAATGGATATGCTGAGAAATCTATGTACAAGTCTGATGCTGATCGTGGTCAGTGGAAGTCGTCGAGATCACCACCTGGATCTAGATCAAGATCTGCTGAATTGTCACCAAGGCGTGGAAGATGA | 831 | 0.5259 | MRRNSPAYYSPPRRGYGGGGRGGGGGGGGGGSGRRGFGGGRRRDSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISVVVAEETRKRPEEMRHRTSRLRGPAGYGGQRSSRYGRSRSRSVTRSRSPPYHSGSRNRYRSRSYSPAPRRQSDYSVSPRRQAEHPRSPRGPPRERDGEQKRRSYSPAYGNGIEQNQSNGYAEKSMYKSDADRGQWKSSRSPPGSRSRSAELSPRRGR* | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g2111 | 276 | MobiDBLite | consensus disorder prediction | 126 | 276 | - | - | |
Gso2g2111 | 276 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 28 | 274 | - | - | |
Gso2g2111 | 276 | MobiDBLite | consensus disorder prediction | 195 | 221 | - | - | |
Gso2g2111 | 276 | Gene3D | - | 39 | 182 | IPR012677 | - | |
Gso2g2111 | 276 | MobiDBLite | consensus disorder prediction | 227 | 242 | - | - | |
Gso2g2111 | 276 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 47 | 125 | IPR000504 | GO:0003723 | |
Gso2g2111 | 276 | MobiDBLite | consensus disorder prediction | 152 | 194 | - | - | |
Gso2g2111 | 276 | SMART | rrm1_1 | 48 | 121 | IPR000504 | GO:0003723 | |
Gso2g2111 | 276 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Gso2g2111 | 276 | SUPERFAMILY | RNA-binding domain, RBD | 44 | 154 | IPR035979 | GO:0003676 | |
Gso2g2111 | 276 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 49 | 118 | IPR000504 | GO:0003723 | |
Gso2g2111 | 276 | PANTHER | OS02G0252100 PROTEIN | 28 | 274 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g2111 | Gso-Chr2 | 45705970 | 45709522 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g2111 | 30 | 109 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 38.272 | 2.59e-07 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g2111 | K12900 | - | gmx:100804294 | 446.817 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso14g0588 | 14 | 5735430 | 5739002 | Gso2g2111 | 2 | 45705970 | 45709522 | GST |