Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2098 ATGATGAGTTTGTGTTCCTCCAAAGGAACCTGTTCTGGTGACACCAATGCACACGTTTCCTCTTCTACTGTTGGAAATTACTCTTCTGACAAAAAAAGGCACAACAACAAATTCATAACCTTTTTGAGAAAAACCATGTGGGAGTATGCTTTGGCATGTGTTGGTGTTGTTCCTTGTGGCGGCAATAACGACCTTAACGGTCAAAGGAAGACAACTTTGGAGCACAACAAGGCGTGGTTGCTGGCGGATTCTGGAGCCGAATTGGCGAGTGCTGACCCTCGATCGGTTCACTCGTCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTATTCTGCTTCTGCTGCCGCTGCTGCAACCTTTTTGATGGTGAATTTGGACTATGAGTCTCAAGTGAGGGAGTTGAAATGGAGGAGAATACAGTCACTGGAGAAAAGCCTGTCTCCGGTGGCCAACACTTTGATCAGGTTCAGCTATGATGAAATTCTGTCTGCTACTCGCAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTATTTAGAGGAAGAGTTGGGATTTGGAGGACTGCTGTTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTGAATGACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCGGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGAGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGGGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGGTACGAAGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATAAAGCCTTCAAACATTCTGCTTTCCTCTAAGAAGATTCCCAAGTTATGCGATTTTGGGCTAGCTTCATGGACTTCTGCACCTTCAGTCCCTTTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTTGAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTCTATTGGAGCTCTTAACTGGCCGCAATCCAATTGAAGCAAAACGACCCCCTGGAGAGGAAAACTTAGTAGTATGGGCAAAACCCTTGCTGAGAAAAGGAAAAGGAGCCATTGAGGAGTTGCTTGATCCTCAAGTCAAGTACAATTCGAGTTACACAGATCAAATGGTTCGAATGATTGATGCAGCTTCTGTCTGTGTTACAAGTGAAGAATCTAGGAGGCCTAGCATAGGTGAGATTGTTGCAATATTGAAAGGTGAAGTAGAGCATGTTCTCTCTAGAAGAAGGAAATCTGGTTATTTTGGCAATGGATATATGATTGATAATTACCCTAAGTTACAAGAAACAAATAATGAGATGAAAAGTCACTTGGCTTTAGCTATGCTAGGAGTTCCAGAGTGTGAGGATGAAGATTTTGTCTATTGTCATTGA 1545 0.4311 MMSLCSSKGTCSGDTNAHVSSSTVGNYSSDKKRHNNKFITFLRKTMWEYALACVGVVPCGGNNDLNGQRKTTLEHNKAWLLADSGAELASADPRSVHSSFRFSFCSQVEVESFNMSYSASAAAAATFLMVNLDYESQVRELKWRRIQSLEKSLSPVANTLIRFSYDEILSATRNFSKERVLGRGALSCVFRGRVGIWRTAVAIKRLDKEDKECAKAFCRELMIASSLNDTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKGVKGSSPLPWSVRYEVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFEHGKVSDKTDVYALGVVLLELLTGRNPIEAKRPPGEENLVVWAKPLLRKGKGAIEELLDPQVKYNSSYTDQMVRMIDAASVCVTSEESRRPSIGEIVAILKGEVEHVLSRRRKSGYFGNGYMIDNYPKLQETNNEMKSHLALAMLGVPECEDEDFVYCH* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2098 514 SUPERFAMILY Protein kinase-like (PK-like) 155 457 IPR011009 -
Gso2g2098 514 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 24 513 - -
Gso2g2098 514 SMART serkin_6 175 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2098 514 PANTHER OS01G0750732 PROTEIN 24 513 - -
Gso2g2098 514 Gene3D Transferase(Phosphotransferase) domain 1 253 469 - -
Gso2g2098 514 ProSiteProfiles Protein kinase domain profile. 175 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2098 514 Pfam Protein kinase domain 175 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2098 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Gso2g2098 514 Gene3D Phosphorylase Kinase; domain 1 136 252 - -
Gso2g2098 514 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2098 Gso-Chr2 45582569 45585647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2098 163 458 Trihelix Transcription Factor Family AT1G70460 40.268 7.14e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso2g2098 Pkinase 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2098 - - gmx:100802176 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1822 14 50563258 50566439 Gso2g2098 2 45582569 45585647 GST
Gso18g0347 18 3283586 3286862 Gso2g2098 2 45582569 45585647 PCT
Gso13g1268 13 27958252 27961370 Gso2g2098 2 45582569 45585647 PCT
Gso2g2098 2 45582569 45585647 Gso18g0347 18 3283586 3286862 PCT
Gso2g2098 2 45582569 45585647 Gso13g1268 13 27958252 27961370 PCT