Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g2083 | ATGAAGTCCGCGCGAGTCAAAGAAGCGATTCTGTTAGTGTTTATGTTTACTATCTTAACCATTGCAGGTTCGGATCTAGCTTCGGACAGAGCCGGGTTATTGTTACTCCGAAGCGCGGTGGGGGGACGCACTTTGTTATGGAACGCCACCCAAACAAGCCCTTGTTCGTGGACCGGCGTGGTCTGCGCCAGCGGGAGAGTAATCATGCTGCGTCTTCCCGCGATGGGTCTCTCCGGTTCGCTTCCCTCCGGTTTGGGCAACCTCACCGAACTGCAGACGCTCTCTCTCCGGTTCAACGCGCTAACCGGACAAATCCCCGATGATTTCGCTAACCTGAAAGCTCTCCGTAACCTCTATCTACAGGGAAACTTCTTCTCCGGCCAAGTCTCCGATTCGGTGTTCGCGTTGCAGAATCTCGTGAGGTTGAATTTAGGTAACAACAATTTCAGCGGCGAGATTTCGCCAAAGTTCAATAGCCTCACTCGTTTGGCCACTCTTTATCTCGAACGCAACAATTTCACTGGTTCGATCCCTGACCTCGATGCTCCGCCGCTCGATCAGTTTAATGTGTCGTTTAATTCGCTAACCGGATCCATTCCGAACCGGTTTTCGCGTCTGGACCGAACCGCTTTTCTCGGAAACTCGCTGCTCTGCGGGAAGCCTTTGCAGCTTTGCCCCGGAACTGAGGAGAAGAAGGGTAAACTATCCGGTGGCGCCATTGCGGGCATTGTGATTGGTTCCGTGGTTGGTGTGTTGTTGATTCTGTTGCTTTTGTTCTTTTTGTGTAGAAAAAATAATAGGAAAAATGAGAATGAAACTTTGCCACCTGAGAAGCGTGTTGTGGAAGGTGAAGTGGTGTCTCGTGAGAGTGGCGGGAATTCAGGTTCGGCAGTGGCGGGTTCGGTGGAGAAGAGTGAGATTCGGAGTAGTAGTGGTGGTGGTGCCGGAGATAATAAGAGTTTGGTGTTTTTTGGGAATGTGAGTAGAGTGTTTAGTTTGGATGAGCTGTTGAGGGCTTCAGCTGAAGTTTTAGGGAAAGGCACGTTTGGGACGACTTATAAGGCGACGATGGAGATGGGGGCGAGTGTGGCAGTGAAGAGGTTGAAGGATGTTACTGCAACAGAGAAGGAATTCAGGGAGAAGATTGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCTCACTAAGGGGCTATTACTTTAGCAGGGATGAGAAGCTGGTTGTGTATGACTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGCAAATGGTGGAGTAGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCTCGTGGGATTGCATACATTCATTCGCATGGCCCAACATCCTCCCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAAACTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTACCTTGCTCTCCCAACCTCTACACCAAACCGTGTGTCTGGTTACCGTGCGCCAGAGGTCACTGATGCACGCAAGATATCCCAAAAGGCCGATGTCTATAGCTTTGGTATCATGCTTTTGGAGCTGCTTACAGGGAAGGCTCCTACTCATTCTTCACTAACTGAGGAAGGGGTGGACCTCCCAAGATGGGTCCAATCTGTGGTTCAAGATGAGTGGAACACTGAGGTATTTGACATGGAGCTTCTAAGGTACCAAAATGTTGAGGAGGAAATGGTCAAGCTTTTGCAGCTTGCCCTTGAATGTACCGCTCAATATCCTGACAAGAGACCTTCAATGGATGTGGTGGCAAGCAAGATTGAGGAAATTTGTCATCCTAGTTTAGAGAAAGAGGAAGGGAAGAACCATGATTTTAAAGATGCTGATAATGGATTTTCCCAACAGTACTATTCTGTTGACTCGGGTGTGTCACAAGCTTGA | 1932 | 0.4902 | MKSARVKEAILLVFMFTILTIAGSDLASDRAGLLLLRSAVGGRTLLWNATQTSPCSWTGVVCASGRVIMLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGQIPDDFANLKALRNLYLQGNFFSGQVSDSVFALQNLVRLNLGNNNFSGEISPKFNSLTRLATLYLERNNFTGSIPDLDAPPLDQFNVSFNSLTGSIPNRFSRLDRTAFLGNSLLCGKPLQLCPGTEEKKGKLSGGAIAGIVIGSVVGVLLILLLLFFLCRKNNRKNENETLPPEKRVVEGEVVSRESGGNSGSAVAGSVEKSEIRSSSGGGAGDNKSLVFFGNVSRVFSLDELLRASAEVLGKGTFGTTYKATMEMGASVAVKRLKDVTATEKEFREKIEQVGKMVHHNLVSLRGYYFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAYIHSHGPTSSHGNIKSSNILLTKTFEARVSDFGLAYLALPTSTPNRVSGYRAPEVTDARKISQKADVYSFGIMLLELLTGKAPTHSSLTEEGVDLPRWVQSVVQDEWNTEVFDMELLRYQNVEEEMVKLLQLALECTAQYPDKRPSMDVVASKIEEICHPSLEKEEGKNHDFKDADNGFSQQYYSVDSGVSQA* | 644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g2083 | 643 | Gene3D | Phosphorylase Kinase; domain 1 | 315 | 412 | - | - | |
Gso2g2083 | 643 | MobiDBLite | consensus disorder prediction | 289 | 314 | - | - | |
Gso2g2083 | 643 | MobiDBLite | consensus disorder prediction | 271 | 285 | - | - | |
Gso2g2083 | 643 | SUPERFAMILY | Protein kinase-like (PK-like) | 342 | 602 | IPR011009 | - | |
Gso2g2083 | 643 | Gene3D | Ribonuclease Inhibitor | 182 | 229 | IPR032675 | - | |
Gso2g2083 | 643 | SUPERFAMILY | L domain-like | 48 | 223 | - | - | |
Gso2g2083 | 643 | ProSitePatterns | Protein kinases ATP-binding region signature. | 344 | 366 | IPR017441 | GO:0005524 | |
Gso2g2083 | 643 | PANTHER | OS05G0588300 PROTEIN | 8 | 608 | - | - | |
Gso2g2083 | 643 | Gene3D | Ribonuclease Inhibitor | 35 | 181 | IPR032675 | - | |
Gso2g2083 | 643 | CDD | STKc_IRAK | 344 | 607 | - | - | |
Gso2g2083 | 643 | Gene3D | Transferase(Phosphotransferase) domain 1 | 413 | 631 | - | - | |
Gso2g2083 | 643 | Pfam | Leucine rich repeat N-terminal domain | 27 | 62 | IPR013210 | - | |
Gso2g2083 | 643 | ProSiteProfiles | Protein kinase domain profile. | 338 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso2g2083 | 643 | PANTHER | LRR RECEPTOR-LIKE KINASE | 8 | 608 | - | - | |
Gso2g2083 | 643 | MobiDBLite | consensus disorder prediction | 271 | 314 | - | - | |
Gso2g2083 | 643 | Pfam | Protein kinase domain | 341 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g2083 | Gso-Chr2 | 45421415 | 45424931 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g2083 | 25 | 607 | Receptor kinase-like Gene Family | AT1G48480 | 57.423 | 0.0 | 682 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Gso2g2083 | Pkinase | 3.1e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g2083 | - | - | gmx:100801103 | 1177.16 |