Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2083 ATGAAGTCCGCGCGAGTCAAAGAAGCGATTCTGTTAGTGTTTATGTTTACTATCTTAACCATTGCAGGTTCGGATCTAGCTTCGGACAGAGCCGGGTTATTGTTACTCCGAAGCGCGGTGGGGGGACGCACTTTGTTATGGAACGCCACCCAAACAAGCCCTTGTTCGTGGACCGGCGTGGTCTGCGCCAGCGGGAGAGTAATCATGCTGCGTCTTCCCGCGATGGGTCTCTCCGGTTCGCTTCCCTCCGGTTTGGGCAACCTCACCGAACTGCAGACGCTCTCTCTCCGGTTCAACGCGCTAACCGGACAAATCCCCGATGATTTCGCTAACCTGAAAGCTCTCCGTAACCTCTATCTACAGGGAAACTTCTTCTCCGGCCAAGTCTCCGATTCGGTGTTCGCGTTGCAGAATCTCGTGAGGTTGAATTTAGGTAACAACAATTTCAGCGGCGAGATTTCGCCAAAGTTCAATAGCCTCACTCGTTTGGCCACTCTTTATCTCGAACGCAACAATTTCACTGGTTCGATCCCTGACCTCGATGCTCCGCCGCTCGATCAGTTTAATGTGTCGTTTAATTCGCTAACCGGATCCATTCCGAACCGGTTTTCGCGTCTGGACCGAACCGCTTTTCTCGGAAACTCGCTGCTCTGCGGGAAGCCTTTGCAGCTTTGCCCCGGAACTGAGGAGAAGAAGGGTAAACTATCCGGTGGCGCCATTGCGGGCATTGTGATTGGTTCCGTGGTTGGTGTGTTGTTGATTCTGTTGCTTTTGTTCTTTTTGTGTAGAAAAAATAATAGGAAAAATGAGAATGAAACTTTGCCACCTGAGAAGCGTGTTGTGGAAGGTGAAGTGGTGTCTCGTGAGAGTGGCGGGAATTCAGGTTCGGCAGTGGCGGGTTCGGTGGAGAAGAGTGAGATTCGGAGTAGTAGTGGTGGTGGTGCCGGAGATAATAAGAGTTTGGTGTTTTTTGGGAATGTGAGTAGAGTGTTTAGTTTGGATGAGCTGTTGAGGGCTTCAGCTGAAGTTTTAGGGAAAGGCACGTTTGGGACGACTTATAAGGCGACGATGGAGATGGGGGCGAGTGTGGCAGTGAAGAGGTTGAAGGATGTTACTGCAACAGAGAAGGAATTCAGGGAGAAGATTGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCTCACTAAGGGGCTATTACTTTAGCAGGGATGAGAAGCTGGTTGTGTATGACTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGCAAATGGTGGAGTAGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCTCGTGGGATTGCATACATTCATTCGCATGGCCCAACATCCTCCCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAAACTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTACCTTGCTCTCCCAACCTCTACACCAAACCGTGTGTCTGGTTACCGTGCGCCAGAGGTCACTGATGCACGCAAGATATCCCAAAAGGCCGATGTCTATAGCTTTGGTATCATGCTTTTGGAGCTGCTTACAGGGAAGGCTCCTACTCATTCTTCACTAACTGAGGAAGGGGTGGACCTCCCAAGATGGGTCCAATCTGTGGTTCAAGATGAGTGGAACACTGAGGTATTTGACATGGAGCTTCTAAGGTACCAAAATGTTGAGGAGGAAATGGTCAAGCTTTTGCAGCTTGCCCTTGAATGTACCGCTCAATATCCTGACAAGAGACCTTCAATGGATGTGGTGGCAAGCAAGATTGAGGAAATTTGTCATCCTAGTTTAGAGAAAGAGGAAGGGAAGAACCATGATTTTAAAGATGCTGATAATGGATTTTCCCAACAGTACTATTCTGTTGACTCGGGTGTGTCACAAGCTTGA 1932 0.4902 MKSARVKEAILLVFMFTILTIAGSDLASDRAGLLLLRSAVGGRTLLWNATQTSPCSWTGVVCASGRVIMLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGQIPDDFANLKALRNLYLQGNFFSGQVSDSVFALQNLVRLNLGNNNFSGEISPKFNSLTRLATLYLERNNFTGSIPDLDAPPLDQFNVSFNSLTGSIPNRFSRLDRTAFLGNSLLCGKPLQLCPGTEEKKGKLSGGAIAGIVIGSVVGVLLILLLLFFLCRKNNRKNENETLPPEKRVVEGEVVSRESGGNSGSAVAGSVEKSEIRSSSGGGAGDNKSLVFFGNVSRVFSLDELLRASAEVLGKGTFGTTYKATMEMGASVAVKRLKDVTATEKEFREKIEQVGKMVHHNLVSLRGYYFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAYIHSHGPTSSHGNIKSSNILLTKTFEARVSDFGLAYLALPTSTPNRVSGYRAPEVTDARKISQKADVYSFGIMLLELLTGKAPTHSSLTEEGVDLPRWVQSVVQDEWNTEVFDMELLRYQNVEEEMVKLLQLALECTAQYPDKRPSMDVVASKIEEICHPSLEKEEGKNHDFKDADNGFSQQYYSVDSGVSQA* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2083 643 Gene3D Phosphorylase Kinase; domain 1 315 412 - -
Gso2g2083 643 MobiDBLite consensus disorder prediction 289 314 - -
Gso2g2083 643 MobiDBLite consensus disorder prediction 271 285 - -
Gso2g2083 643 SUPERFAMILY Protein kinase-like (PK-like) 342 602 IPR011009 -
Gso2g2083 643 Gene3D Ribonuclease Inhibitor 182 229 IPR032675 -
Gso2g2083 643 SUPERFAMILY L domain-like 48 223 - -
Gso2g2083 643 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Gso2g2083 643 PANTHER OS05G0588300 PROTEIN 8 608 - -
Gso2g2083 643 Gene3D Ribonuclease Inhibitor 35 181 IPR032675 -
Gso2g2083 643 CDD STKc_IRAK 344 607 - -
Gso2g2083 643 Gene3D Transferase(Phosphotransferase) domain 1 413 631 - -
Gso2g2083 643 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Gso2g2083 643 ProSiteProfiles Protein kinase domain profile. 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2083 643 PANTHER LRR RECEPTOR-LIKE KINASE 8 608 - -
Gso2g2083 643 MobiDBLite consensus disorder prediction 271 314 - -
Gso2g2083 643 Pfam Protein kinase domain 341 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2083 Gso-Chr2 45421415 45424931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2083 25 607 Receptor kinase-like Gene Family AT1G48480 57.423 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso2g2083 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2083 - - gmx:100801103 1177.16