Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2076 ATGGATGCTCCGGTTAAGAAAAAGGCATTGTCTCGTCCTAGCTTGAGTCCTCAGAAGAAAGACAAGTGCATAGTTTTTCCCCTTGTGAGGTATAATGAATTCCGGCAGCCTGTTTGCCAGGCTTGTAATGTAGTTATGTTGGAGTCTATACGTGCACACCTAGCTTCTCCTGAGCATCACGAGGTAATGGAAAAACTGAAAGCTAATGCTGCTGGATCAACTGAAGATAAGGATGCAAAGCCAGTTACTGTTACCAACAACTCTCCCAAGGCTAATCCAGAACAACCTCAAGACACAGCAAGCCAACTGCCTGAATTTTCACAAGATGTGCCAAAACAGCAGTCACCATCTGCTCTTCCACGAGATTTTTGTGATGACAGTGGTAAAATAAGGACAAGATCTGTTTCAAAAGTAACCGAAATGACGGATCCTCCTAAAGAACAAGAACACCAGGAATCCATAGTTTCACCTTCCACAGATGAAGCTTTGACATCTTCGAAACGTGGAAGGTCACGAAAAACAAAGCCTACCAAGTTCATAATTAACCAGAAATCCAATACCCCATCAACACCCCGAAGATCTAAAAGAATAAAGCATGTGGCAGATAAAACTGCCAACAATGTTCCCGAAGTATCTTCATCCGAGGAATTATTGAAGGTAAAATTAATTACATTACTGAAGGGACGTACAGCTGAAAATTCACAAGTAGATGGCAAAGAAGTCTCTTCAGATATCGATGCCTTAGTAATCTACAAAAGAAAAAGACTACCTCGAAGGAGGTCTTCTGGTCAAATAGGCAAGTCCCCAAAGAAAACTGTTCCTACAGAGCCTCCAACTGCTGCAATTTCAAGCTCTACTACTGCATCACCTCCTCATCAAGATCCTCCTGCAGCTGCTCCAGCCAATGCTGATGCTTCTCATATTGAAAATACAAACACTGCTGAGCCAGTATTGAGTAAAAGCCTTGTCGAAGAGGTCGGGAAAGTGAACCCTGCTCCAGCCAATGCTCAAGAACAAATTGCTTCCAGCAAGGGTCAAGAATCTCCAGATCAAGTTGACTCAAAGGCTGATGAAGTCTCTACTGGGAACACCCCACTCGATCTAGAAGCCATTAACAAAATGATTGAAGATGACCCTTTGAGTGCTATTGAAAATATTCTGACAGGGAAGGTTTCCATTTCTTCCAAGACTCCACAATCTATCACTCAGGCAGAACAACCAAAAGTTCAAGGCTCCCCTGCAGATGTTCTGTCTAAAGAGCTAAAAGACTTAATGCAGACCTTTAGCTTAGGTGATTTTGTTACTGACTATGAACAAATGTCAAAGGTCCTACTTATTCTTGAAGAGTTGCAGAAGAATGAGAAGTTTCTTTCTCATGAACAGCAAACATTCATAAAGGCCTTCAGACTCTTCTTCAACAATGCTGTTACTCACCGCAAAGAATGTGATATGGCTAGAATAAAGAAAGTCGACTTGAACCGAGCTAAAGAAGATATCCTTCGCAAACTGCAAGAAGTTAAACATACACAGGAACAAATCACAATGTCCATTTCAAATGCCGACAACAGGGTCAATGAAATATCTTCTTGTATTGAACAACTTGAAGAACAGTTATACAAACTGAAGGAAGAGAGGGAGACCTTTCAGTTGGCTATTAAGGAACGGGAGAAACAAAGGGAGACATTGAAGAATGATAGCATCTTATGGGCTCATCAGACTAAGGACCTGGTTTTTGATCTTGCAGAGATTGAGGCCAAAGAAAAAATCCTTGGACAGCAACTTGAAGCCGACAATGATGCATATGACCAATTTAAAGCGTCCTTTCCTTTTTAA 1833 0.4146 MDAPVKKKALSRPSLSPQKKDKCIVFPLVRYNEFRQPVCQACNVVMLESIRAHLASPEHHEVMEKLKANAAGSTEDKDAKPVTVTNNSPKANPEQPQDTASQLPEFSQDVPKQQSPSALPRDFCDDSGKIRTRSVSKVTEMTDPPKEQEHQESIVSPSTDEALTSSKRGRSRKTKPTKFIINQKSNTPSTPRRSKRIKHVADKTANNVPEVSSSEELLKVKLITLLKGRTAENSQVDGKEVSSDIDALVIYKRKRLPRRRSSGQIGKSPKKTVPTEPPTAAISSSTTASPPHQDPPAAAPANADASHIENTNTAEPVLSKSLVEEVGKVNPAPANAQEQIASSKGQESPDQVDSKADEVSTGNTPLDLEAINKMIEDDPLSAIENILTGKVSISSKTPQSITQAEQPKVQGSPADVLSKELKDLMQTFSLGDFVTDYEQMSKVLLILEELQKNEKFLSHEQQTFIKAFRLFFNNAVTHRKECDMARIKKVDLNRAKEDILRKLQEVKHTQEQITMSISNADNRVNEISSCIEQLEEQLYKLKEERETFQLAIKEREKQRETLKNDSILWAHQTKDLVFDLAEIEAKEKILGQQLEADNDAYDQFKASFPF* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2076 610 Coils Coil 517 565 - -
Gso2g2076 610 MobiDBLite consensus disorder prediction 335 363 - -
Gso2g2076 610 MobiDBLite consensus disorder prediction 70 213 - -
Gso2g2076 610 MobiDBLite consensus disorder prediction 277 292 - -
Gso2g2076 610 MobiDBLite consensus disorder prediction 79 115 - -
Gso2g2076 610 MobiDBLite consensus disorder prediction 331 363 - -
Gso2g2076 610 MobiDBLite consensus disorder prediction 250 307 - -
Gso2g2076 610 Coils Coil 489 512 - -
Gso2g2076 610 PANTHER UNCHARACTERIZED 1 609 IPR040050 GO:0003676|GO:0005681|GO:0008270
Gso2g2076 610 MobiDBLite consensus disorder prediction 140 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2076 Gso-Chr2 45356354 45360324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2076 1 72 C2H2 Transcription Factor Family AT3G02860 56.757 1.94e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2076 - K13104 gmx:100527920 1139.79