Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2070 ATGATGAGTGCCTCTTCCTCCAGAAAAGTGAACAAGGATGAACAAGTGGCACAACGTAAAATCCACAAGCCAAGGTGGCTTGAGGCTTTTCTGAAAAAAACGTTCTTTGACTCATGTCCATCTCATCCATTTCGTAGGAATGAGTTAAATAAATATTGTATAAATTGTAATTTGTCAGTTTGCCAATATTGTGTAACGTTGCCTCCTCATCGCCATCACAAGATACTTAAAATCTATAGGCATGTTTACAAGGATGTTGTCTCCCTTACAACCATGGAAAAATATATTGACAGCTCACAAATTCAGCCTTACAAATGCAACAAGAGACTAGTTATTTCTCTGAATCCTCTCCCGCATTCCGGTTCAACAACAAATAATGAGGCATCATGCAATATTTGCAATAGAAAATTGACTGAACCCGATTTATATCGCTATTGCTCTATTTCTTGCAAGGTCAAAGCTGTTTTAAGTAAGCTTGATGATTCAGTTCCTCCTTTCATTTCTATCCAGACTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTCAAGAAAAGCAGGAGGAAACTCCTGAACCCCAAAAGCTACGAGAAAGGAAAAGAAAGGGAATACCCCATAGAGCTCCCTTCTTCTAA 630 0.3952 MMSASSSRKVNKDEQVAQRKIHKPRWLEAFLKKTFFDSCPSHPFRRNELNKYCINCNLSVCQYCVTLPPHRHHKILKIYRHVYKDVVSLTTMEKYIDSSQIQPYKCNKRLVISLNPLPHSGSTTNNEASCNICNRKLTEPDLYRYCSISCKVKAVLSKLDDSVPPFISIQTPPPPPPLPPSQEKQEETPEPQKLRERKRKGIPHRAPFF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2070 209 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 209 - -
Gso2g2070 209 SUPERFAMILY B-box zinc-binding domain 38 81 - -
Gso2g2070 209 Gene3D Classic Zinc Finger 32 106 - -
Gso2g2070 209 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 4 209 - -
Gso2g2070 209 CDD Bbox2 39 78 - -
Gso2g2070 209 ProSiteProfiles Zinc finger B-box type profile. 39 78 IPR000315 GO:0008270
Gso2g2070 209 MobiDBLite consensus disorder prediction 165 209 - -
Gso2g2070 209 MobiDBLite consensus disorder prediction 167 184 - -
Gso2g2070 209 Pfam PLATZ transcription factor 80 152 IPR006734 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso2g2070 PLATZ 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2070 - - tcc:18601328 272.322