Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2068 ATGAAACCTTTAGCCTTGTTGGCCATTGGTGTCTTCACCATGATGACTCTCTTGGCAAGCTCTCAAGAAGATGATGATGCTTCTGTTATGCTGGCTCTCAAGAACAGCCTCAATCCGCCGGGCTGGTCCGACCCGGACCCGTGCAAGTGGGCCCGCGTCAGATGCTCCGACAACAAACGGGTCACCCGGATCCAAATCGGGCGCCTCAACCTCCAAGGCACCCTCCCAACAACCCTCCAGAAGCTCACCCAGTTAGAACACTTGGAGCTCCAATACAACAACATCTCGGGCCCACTACCTTCCCTCAACGGCTTAAGCAGCCTCCGCGTCTTCGTGGCCAGCAACAACCGCTTCTCCGCCGTCCCCGCCGACTTCTTCTCCGACATGTCGCAGCTCCAGGCAGTGGAGATAGACAACAACCCGTTTGAGCCATGGGAGATTCCTCAGAGTCTCCGAAACGCTTCCGGGCTTCAGAACTTCTCTGCCAACTCGGCCAACGTCAGAGGCACCATGCCGGACTTCTTCAGCTCTGATGTTTTCCCCGGGTTGACGCTTTTGCACTTGGCTATGAACAGCCTCGAGGGAACTTTTCCGTTGAGTTTCTCTGGGTCGCAGATTCAATCTCTGTGGGTGAATGGACAGAAGAGTGTTAACAAGCTCGGTGGGAGTGTTGAGGTTCTGCAGAACATGACTTTCTTGACCCAAGTTTGGTTGCAATCTAATGCTTTCACGGGTCCCTTGCCTGATTTGTCCGCGCTGAAGAGCTTGCGTGATTTGAATTTGAGGGATAACAGGTTCACTGGTCCTGTTTCGACTTTATTGGTGGGTCTCAAGACGCTTAAAGTTGTGAACTTGACTAATAATTTGTTTCAGGGTCCAATGCCGGTGTTTGCTGATGGGGTTGTGGTGGATAATATTAAGGATTCGAATAGTTTTTGCTTGCCGAGTCCGGGTGATTGTGATCCCAGGGTGGATGTTCTTCTTTCTGTTGCTGGGGTTGTGGGGTATCCTCAAAGGTTTGCTGAGAGTTGGAAGGGAAATGATCCCTGTGGTGATTGGATTGGGATTACATGTAGTAATGGGAATATAACGGTTGTTAATTTTCAGAAGATGGGACTTAGTGGTGTGATATCGCCTGACTTTGCTAAACTTAAATCCTTGCAAAGGATAATGTTAGCTGATAACAATCTCACTGGTTCGATTCCGGAGGAGCTTGCTACTTTACCTGCGCTTACTCAATTGAATGTTGCGAATAATCAGCTTTATGGAAAGGTGCCAAGTTTTAGGAAAAATGTAGTTGTGAGTACAAGTGGTAACATTGATATAGGGAAGGATAAGAGTAGTTTATCCCCGCAGGGTCCGGTGTCTCCAATGGCTCCCAATGCCAAGGGAGAAAGTGGCGGGGGTCCAGGAAATGGTGGCAAAAAGTCTTCTTCCCGTGTGGGAGTAATTGTGTTTTCAGTGATTGGGGCTGTGTTTGTGGTTTCAATGATTGGTTTCTTGGTTTTCTGCTTGTTTAGGATGAAGCAAAAGAAGCTGAGCAGGGTCCAGAGCCCAAATGCCCTTGTTATTCATCCTAGGCATTCAGGATCCGATAATGAGAGTGTAAAGATAACCGTAGCTGGTTCAAGTGTCAACGTTGGTGCTGCCAGTGAAACGCGAACCATGCCTGGCAGTGAGGCAAGTGATATTCAAATGGTTGAAGCAGGAAATATGGTCATTTCCATACAAGTTCTGAAGAACGTCACCGACAATTTCAGTGAGAAGAATGTTCTGGGACAAGGAGGTTTTGGAACGGTTTATAGAGGTGAACTCCATGATGGTACAAGAATTGCGGTGAAAAGAATGGAGTGTGGGGCAATAGCTGGGAAGGGTGCGACAGAATTCAAGTCCGAAATTGCTGTTTTGACTAAGGTTCGCCACCGGCATCTTGTTGCCCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTACGAGTACATGCCTCAGGGAACGTTGAGTAGCCATCTTTTTAATTGGCCAGAGGAAGGACTAGAACCACTGGAGTGGAATAGAAGATTGACAATTGCCTTGGATGTGGCAAGGGGTGTTGAGTACCTGCATAGCTTGGCCCATCAAAGCTTCATACATAGGGATTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCTATAGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCGCCAGAGTATGCAGTTACTGGCCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGGGTAATATTGATGGAGCTCATGACAGGAAGGAAAGCACTTGATGAGACTCAACCCGAGGATAGCATGCACCTTGTAACATGGTTCCGCAAAATGTCCATAAATAAGGACTCATTCCGCATGGCCATAGACTCCGCCATGGAGCTCAATGAGGAAACGCTTGCTAGCATTCACACAGTAGCAGAGTTAGCCGGCCACTGCTGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAACGTGCTTTCTTCTCTTGTGGAACTCTGGAAACCATCTGATCAGAATTCTGAAGATATATATGGCATTGACCTTGACATGTCCCTACCACAAGCACTAAAGAAGTGGCAAGCTTACGAAGGTAGAAGCCAAATGGAGTCATCTTCTTCGTCTTCGCTACTTCCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCTTACGGATTTGCTGATTCTTTCACATCAGCAGATGGTAGGTGA 2823 0.4764 MKPLALLAIGVFTMMTLLASSQEDDDASVMLALKNSLNPPGWSDPDPCKWARVRCSDNKRVTRIQIGRLNLQGTLPTTLQKLTQLEHLELQYNNISGPLPSLNGLSSLRVFVASNNRFSAVPADFFSDMSQLQAVEIDNNPFEPWEIPQSLRNASGLQNFSANSANVRGTMPDFFSSDVFPGLTLLHLAMNSLEGTFPLSFSGSQIQSLWVNGQKSVNKLGGSVEVLQNMTFLTQVWLQSNAFTGPLPDLSALKSLRDLNLRDNRFTGPVSTLLVGLKTLKVVNLTNNLFQGPMPVFADGVVVDNIKDSNSFCLPSPGDCDPRVDVLLSVAGVVGYPQRFAESWKGNDPCGDWIGITCSNGNITVVNFQKMGLSGVISPDFAKLKSLQRIMLADNNLTGSIPEELATLPALTQLNVANNQLYGKVPSFRKNVVVSTSGNIDIGKDKSSLSPQGPVSPMAPNAKGESGGGPGNGGKKSSSRVGVIVFSVIGAVFVVSMIGFLVFCLFRMKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVNVGAASETRTMPGSEASDIQMVEAGNMVISIQVLKNVTDNFSEKNVLGQGGFGTVYRGELHDGTRIAVKRMECGAIAGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSSHLFNWPEEGLEPLEWNRRLTIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELMTGRKALDETQPEDSMHLVTWFRKMSINKDSFRMAIDSAMELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2068 940 MobiDBLite consensus disorder prediction 904 940 - -
Gso2g2068 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Gso2g2068 940 MobiDBLite consensus disorder prediction 443 476 - -
Gso2g2068 940 PANTHER OSJNBA0070M12.3 PROTEIN 8 940 - -
Gso2g2068 940 Gene3D Ribonuclease Inhibitor 22 320 IPR032675 -
Gso2g2068 940 ProSiteProfiles Leucine-rich repeat profile. 84 106 IPR001611 GO:0005515
Gso2g2068 940 PANTHER RECEPTOR PROTEIN KINASE TMK1 8 940 - -
Gso2g2068 940 Gene3D Ribonuclease Inhibitor 322 446 IPR032675 -
Gso2g2068 940 Pfam Leucine rich repeat N-terminal domain 324 359 IPR013210 -
Gso2g2068 940 Pfam Leucine rich repeat N-terminal domain 24 56 IPR013210 -
Gso2g2068 940 Pfam Leucine rich repeat 381 421 IPR001611 GO:0005515
Gso2g2068 940 ProSitePatterns Protein kinases ATP-binding region signature. 592 624 IPR017441 GO:0005524
Gso2g2068 940 Pfam Protein tyrosine and serine/threonine kinase 589 860 IPR001245 GO:0004672|GO:0006468
Gso2g2068 940 SUPERFAMILY Protein kinase-like (PK-like) 562 870 IPR011009 -
Gso2g2068 940 SUPERFAMILY L domain-like 55 428 - -
Gso2g2068 940 Gene3D Phosphorylase Kinase; domain 1 546 663 - -
Gso2g2068 940 ProSiteProfiles Protein kinase domain profile. 586 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2068 940 CDD STKc_IRAK 592 865 - -
Gso2g2068 940 Gene3D Transferase(Phosphotransferase) domain 1 664 884 - -
Gso2g2068 940 MobiDBLite consensus disorder prediction 904 929 - -
Gso2g2068 940 SMART serkin_6 586 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2068 940 SMART LRR_typ_2 105 128 IPR003591 -
Gso2g2068 940 SMART LRR_typ_2 253 276 IPR003591 -
Gso2g2068 940 SMART LRR_typ_2 384 408 IPR003591 -
Gso2g2068 940 SMART LRR_typ_2 82 104 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2068 Gso-Chr2 45284420 45288479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2068 75 855 Receptor kinase-like Gene Family AT1G55610 29.598 1.40e-80 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gso2g2068 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2068 - K00924 gmx:100789646 1818.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1792 14 50249455 50253615 Gso2g2068 2 45284420 45288479 GST