Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2063 ATGACCTTGGAAGGGATTTTCATTGAGCCCACCTCAACCACTGCCCCTGATCTTTCTCTTCACATAAGCCCCCCAACCATCTCCTCCTCTTCCTTGATTTCCAATCATGGAAGTAATAATTTCCCTTCAAGAACTACTACTTTGTTTCAACAAGCCCACACAGAACTCTCTCTTGGAAGGAATTTCACTTCTGAAACGCCAACACCAACACCGACACCAACACCAACACCACACAACCCTTATTATCAAAGCCTAAACCACTTCCATCATCTTCACCATCACCACAACCACAACAACAACAACAACACTAGTACTAGTGTTAATACAACAAGTACTACCACTACTAATACTCCCTTGAATCACATAAACTATGGAGTTTCATTGCTTGATGTGTCATCATCAGACACCTTGAGGCCAATCAAGGGGATTCCTGTGTATCACAACCGTTCATTCCCTTTTGTGGCTGCCATGGACCATGCTAGAGACGACGACAACAACAACAACAAGGATCATCACCATCATCACAAGATGTGCTTATATAATAATCATCACAACATGCCTTCTTATCACCCCTCTCTCTCTCCCTCCACAGTTGCTCCTTCTCCTTCACCTTACTTTGTGGATCCCATGTCCCTCTTGAACAACGGCTCCACCGTGGCGGCATGTAGGGCTGCCACCGCCACAAGGTTTAATGGGTTCTCCGGCGATGCTTTCAAATCTTCTCATCCACTGCACCAATATGGGGTTGGTCCTTCAGAGGCTTCTTCTGGGTTCATGAGATCAAGGTTTCTGCAGAAGCTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCATGCCAGATTTGTTCATGCGGTTGAACTTCTTGGTGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACACTAGCTCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCATCTTCAGGCCATTCAGATGGGTCTGGAGAGGATGATTTGTCTCCGATGGGTAGCACCGCCGATCGTGGCGGTCTTCGGCAATTTCCCAACCACAGAGGACGGCCGGAATGGCAGGCGCAACAAGACATGGACTACCCTTCCACCACCCCTATCCTATGGAGTAATTCTTCAAGTTGTGGAGAGTCACGGCTAAGACCTAGTTCTAACGACATAGATGGTCTCAGATCACCTATCCTCCAGTCACAAACAATATCAGGAGGGCATCAAATTCAGGAGTGTGATTCAACCCAACTCAAGAACAACATGGCGGGTTCTAATTTGAAGAAGAACCCAAGCTTGGAATTCACATTAGGAAGACCAGATTGGGATGGCAAAGAACAAGCCTAG 1401 0.4682 MTLEGIFIEPTSTTAPDLSLHISPPTISSSSLISNHGSNNFPSRTTTLFQQAHTELSLGRNFTSETPTPTPTPTPTPHNPYYQSLNHFHHLHHHHNHNNNNNTSTSVNTTSTTTTNTPLNHINYGVSLLDVSSSDTLRPIKGIPVYHNRSFPFVAAMDHARDDDNNNNKDHHHHHKMCLYNNHHNMPSYHPSLSPSTVAPSPSPYFVDPMSLLNNGSTVAACRAATATRFNGFSGDAFKSSHPLHQYGVGPSEASSGFMRSRFLQKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPMGSTADRGGLRQFPNHRGRPEWQAQQDMDYPSTTPILWSNSSSCGESRLRPSSNDIDGLRSPILQSQTISGGHQIQECDSTQLKNNMAGSNLKKNPSLEFTLGRPDWDGKEQA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2063 466 MobiDBLite consensus disorder prediction 58 79 - -
Gso2g2063 466 SUPERFAMILY Homeodomain-like 273 329 IPR009057 -
Gso2g2063 466 Gene3D - 275 332 - -
Gso2g2063 466 MobiDBLite consensus disorder prediction 379 403 - -
Gso2g2063 466 MobiDBLite consensus disorder prediction 98 113 - -
Gso2g2063 466 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 276 329 IPR006447 GO:0003677
Gso2g2063 466 MobiDBLite consensus disorder prediction 441 466 - -
Gso2g2063 466 MobiDBLite consensus disorder prediction 92 113 - -
Gso2g2063 466 MobiDBLite consensus disorder prediction 332 411 - -
Gso2g2063 466 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 465 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso2g2063 466 PANTHER TRANSCRIPTION REPRESSOR KAN1 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2063 Gso-Chr2 45243901 45250538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2063 1 463 G2-like Transcription Factor Family AT5G16560 38.716 1.96e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso2g2063 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2063 - - gmx:100796325 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1790 14 50209913 50216611 Gso2g2063 2 45243901 45250538 GST