Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2055 ATGTCGCTTCTCTGCTTCACCTTTGTCCCCTCAATGCTACTTTCTATTTTCTGTTTCTTCAATTCTGTAACCGCCGCCACCGAGTTCGACTTCGGAACGTTAACCTTGGGAAGCCTCAAGCTCCTCGGCGACGCCCACTTGAACAACAACACCGTCAGTCTCACGCGCGACCTCGCCGTTCCCACCTCCAGTGCCGGCAGAGCCCTTTACTCCCGTCCGGTCAGATTCCGGCAACCTGGAAACCGTTTTTCGGCGAGCTTCACCACCTTCTTTTCCTTCTCCGTCACCAACCTCAACCCCTCCTCAATCGGTGGCGGCCTCGCCTTCGTCCTCTCGCCGGATGACGACACCATCGGCGACGCCGGCGGGTTTCTCGGCCTCGGCGGCGGCGGCGGCTTCATTGCCGTGGAGTTTGATACACTTATGGACGTGGAGTTTAAGGACATTAATGGAAACCACGTTGGTGTGGACCTAAACAGCGTCGTTTCGAGTGAGGTTGGTGATTTGGCGAACGTTGGCGTCGATCTGAAGAGCGGTGACCTAATCAACGCGTGGATCGAGTTCGATGGATCGAGCAAAGGGTTAAGCGTGTGGGTTTCGTATTCCAATCTCAAACCGAAAGATCCCGTTTTGACGATGAATCTCGACGTGGACAAGTATTTGAATGATTTTATGTATGTGGGGTTCTCTGCTTCAACGCAAGGTAGCACAGAGATTCACAGAATAGAGTGGTGGAGTTTCGGTTCGTCTTTTGCGGCGGCAGAGGCGGCGGCGCCTCCTCCTCCGCCGGCGGTGAGTTTGATGAACCCGACGGCGAATTCGGTTGCTCAGTCCGCGCCACCTCCTTCTTTGGCTCCTTCCCATAGTGAAGAGAAAGAGAGCAAAAGCAAATCGTCTTGCCACAATGGGTTGTGTAAGCAAAACTTGGGAGCGGTTGCTGGTGTTGTCACTGCTGGAGCGTTTGTTTTGGCTCTTTTTGCTGGTGCTTTGATTTGGTTTTACTCTAATAAGAAGGTTAAGCGTGTTAACAAGTTTGATTCGCTTGGTTCGGAGATAATCAAAATGCCGAAGCAGTTTAGCTACAAGGAGCTGAAATCTGCTACCAAGTGCTTCAATGCGAATAGGATCATCGGTCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCCGAGAATGGGGACATTGTAGCGGTGAAGAGGTGCAGCCATAGTAGTCAGGGGAAGAATGAGTTTTTGTCTGAGTTGTCTATCATTGGAAGCCTGAGGCATCGGAATCTTGTTCGGCTTCAAGGGTGGTGCCATGAGAAAGGAGAGATTTTGCTGGTGTATGACTTGATGCCTAATGGAAGTTTGGATAAGGCGTTGTTCGAGGCTAGGACGCCGCTTCCCTGGGCTCATAGGCGCAAGATTTTGTTGGGCGTGGCTTCGGCATTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCATAGGGACATTAAGACTAGTAACATAATGTTGGATGAAGGGTTCAATGCCAGGTTGGGAGATTTCGGTCTGGCCAGGCAAACTGAGCATGATAAGTCACCGGATGCCACGGTGGCTGCGGGGACAATGGGGTACTTGGCACCCGAGTATCTCCTTACCGGGAAGGCTACGGAGAAGACTGATGTGTTTAGTTATGGTGCAGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCGATAGAGAAGGATGCCAATGGGGGTGGTAAAGGTGGGATTAGCTGCAATTTGGTAGAATCGGTTTGGAGTTTGCACCGGGAAGGTAGGTTGCTAATGGCAGCCGATCCGAGGCTTGGGGGTGAATTTGATGATGGGGAGATGAGGAGGGTGCTCTTGGTTGGGCTGGCTTGTTCTCACCCTGATCCATTGACTAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGCGAGGCTGAAGTGCCTCTTGTCCCAAGAACCAAGCCGTCGACAGGTTTTAGTACTTCCCATTCCCACTTATTACTGAGTTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACCTCCACATCAGAGAACAGCTTCAATCTTGGAGACATAGTCTGA 2106 0.5138 MSLLCFTFVPSMLLSIFCFFNSVTAATEFDFGTLTLGSLKLLGDAHLNNNTVSLTRDLAVPTSSAGRALYSRPVRFRQPGNRFSASFTTFFSFSVTNLNPSSIGGGLAFVLSPDDDTIGDAGGFLGLGGGGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLANVGVDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLTMNLDVDKYLNDFMYVGFSASTQGSTEIHRIEWWSFGSSFAAAEAAAPPPPPAVSLMNPTANSVAQSAPPPSLAPSHSEEKESKSKSSCHNGLCKQNLGAVAGVVTAGAFVLALFAGALIWFYSNKKVKRVNKFDSLGSEIIKMPKQFSYKELKSATKCFNANRIIGHGAFGTVYKGVLPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWAHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDANGGGKGGISCNLVESVWSLHREGRLLMAADPRLGGEFDDGEMRRVLLVGLACSHPDPLTRPTMRGVVQMLVGEAEVPLVPRTKPSTGFSTSHSHLLLSLQDSVSDCDGIITISTSTSENSFNLGDIV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2055 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Gso2g2055 701 Pfam Legume lectin domain 28 257 IPR001220 GO:0030246
Gso2g2055 701 Gene3D Transferase(Phosphotransferase) domain 1 447 650 - -
Gso2g2055 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 258 IPR013320 -
Gso2g2055 701 MobiDBLite consensus disorder prediction 262 299 - -
Gso2g2055 701 SMART serkin_6 371 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2055 701 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Gso2g2055 701 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 23 694 - -
Gso2g2055 701 CDD STKc_IRAK 377 644 - -
Gso2g2055 701 SUPERFAMILY Protein kinase-like (PK-like) 353 668 IPR011009 -
Gso2g2055 701 Gene3D - 25 259 - -
Gso2g2055 701 Gene3D Phosphorylase Kinase; domain 1 333 446 - -
Gso2g2055 701 MobiDBLite consensus disorder prediction 268 284 - -
Gso2g2055 701 Pfam Protein kinase domain 372 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2055 701 CDD lectin_legume_LecRK_Arcelin_ConA 27 251 IPR001220 GO:0030246
Gso2g2055 701 ProSiteProfiles Protein kinase domain profile. 371 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2055 701 PANTHER - 23 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2055 Gso-Chr2 45165266 45168306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2055 4 683 Receptor kinase-like Gene Family AT3G53380 69.209 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso2g2055 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2055 - - gmx:100793157 1274.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1783 14 50125088 50127835 Gso2g2055 2 45165266 45168306 GST
Gso18g0383 18 3780850 3783520 Gso2g2055 2 45165266 45168306 PCT
Gso2g2055 2 45165266 45168306 Gso18g0383 18 3780850 3783520 PCT