Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2045 ATGGCACCTGTTTTGCCTCCCGGTTTCAGATTCCACCCTACAGACGAAGAACTTGTTGCTTATTACCTTAAAAGAAAGATCAATGGCCGAAAGATTGAGTTAGAGATCATACCTGAAGTTGATCTCTATAAGTGTGAACCATGGGACTTGCCAGGGAAATCATTGTTACCAGGAAAGGATTTGGAGTGGTATTTCTATAGCCCTCGAGATAGGAAGTACCCAAATGGATCAAGAACAAACCGTGCAACCAAATCTGGATATTGGAAGGCCACGGGGAAGGATAGAAAAGTAAATTCCCAGGCTCGGGCTGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATACCGTCTTGATGAGAGAGAATGCGAAACCAATTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGGTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGGGAGCATCACTATGTTAATGTTCCCAATGCCAACCAAATTACAAGTGATCATTCATCAAGTATTGAAATATACCCTGAAGGAAGGGGCGAAGATTTAGATAGCACAAATTATTTTATGCCGGTGGATGCTTGCTCACCACACAACATGGGAAACGAGACTTCTCTCACAATCAATAGTGGGATCATGACAAGGGATCATGAGAAATGGTCACACTTCTCATCACAAGACCCTTTATTTAGTCTTCCAACTTCTTCATTTTCCAAATTTGGAGCCATAGCATACCCTCCATCTAAGGTGGATATAGCACTAGAGTATGCAAGGATGCAGCATAGGTTTGTTTTGCCTCCTTTGGAGGTGGATGACTTCCCTCAAGTTGGAATCTCAGAGCTGAAAATGACACAAGCCTCCGGTTCCATGCAAGGAAGCAGAACTGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCAAGTTTCTCAGGAATTAATAAATCAATCCAACTACTCGCAGGAATGGGGTGGCAATAATGATAATTATGCTCCTCGTGAAGATGATTTTACCTTCATGGTTGGCACTAATTACAATCATTCAAATCATGGAATGAGCTCAATGAGGTATGCTGACAAAACATGGGAAGATGCAAACACAAGGACAATAGAGATCGGAGATGTGGATGAAGAATTTAAGGCAGAGAGGATGGTGGAGAATTTAAGATGGGTTGGAATGTCAAGTGAAGATTTACAAAAGATGGAAGAACAAAAGATTGTCCCAATAGAAGATATTTCAAGCTTCCAAACTAATGAGGTGCAAGAATCTGAGCAACATAGCAACAAGGAGCACAATGACGACACTGAAATCAACGATTTCTCATTGGGCTTCATCAATGACAATGATGACCCTAACGAGAACTTCATAGAAGATGGTAACATAGATGATTATTCAAGTTCTCCTAGCTTTGAGGTCGTTGAGGAAATAAAGGTCAATCATGGAATGTTAGTTTCGACTCATCAAGTAGTGGAGACATTCTTTCACCAAATAGTTCCTTCACAAACTGTTCAAGTTCACCTCATCAATTCAGTGATGGCACATAACAATCATTATGTAGAGAATGCAGAGGCAATGCTAATGATAATGGAGAACAAAGGGTCTTCATTAAGGAATAAGGTTAAGGCCTATGTGATGGGGAAGCTTATAAAACCTTCAAAGACAATTGCAAGTGCAATTGTATTCGTCTTTGCACTTGTGTTGATGCATTGTGTTTATTTGAAGGAAGAAGTGGAAATTTGGAATGAGTCAAATAATGAGGTTAATTGGTTTGTTGGTGTCAAAAGTCATGAGAAAGAATTAAGTGCAGTCTTGAAGAAAATAGGCATTTTTCTCACCATATCTTTGGCTTTTTGTACCATGTGGGCTAGCCAGAATATGGTAGTTAACCCTTGA 1932 0.4053 MAPVLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFYSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETNSGLQDAYALCRVVKKTAVIPPKVGEHHYVNVPNANQITSDHSSSIEIYPEGRGEDLDSTNYFMPVDACSPHNMGNETSLTINSGIMTRDHEKWSHFSSQDPLFSLPTSSFSKFGAIAYPPSKVDIALEYARMQHRFVLPPLEVDDFPQVGISELKMTQASGSMQGSRTETDILQEILSVAQVSQELINQSNYSQEWGGNNDNYAPREDDFTFMVGTNYNHSNHGMSSMRYADKTWEDANTRTIEIGDVDEEFKAERMVENLRWVGMSSEDLQKMEEQKIVPIEDISSFQTNEVQESEQHSNKEHNDDTEINDFSLGFINDNDDPNENFIEDGNIDDYSSSPSFEVVEEIKVNHGMLVSTHQVVETFFHQIVPSQTVQVHLINSVMAHNNHYVENAEAMLMIMENKGSSLRNKVKAYVMGKLIKPSKTIASAIVFVFALVLMHCVYLKEEVEIWNESNNEVNWFVGVKSHEKELSAVLKKIGIFLTISLAFCTMWASQNMVVNP* 644
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2045 643 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Gso2g2045 643 Coils Coil 532 552 - -
Gso2g2045 643 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 395 - -
Gso2g2045 643 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Gso2g2045 643 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Gso2g2045 643 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 395 - -
Gso2g2045 643 MobiDBLite consensus disorder prediction 430 453 - -
Gso2g2045 643 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Gso2g2045 643 MobiDBLite consensus disorder prediction 436 450 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso2g2045 Gso-Chr2 45076161 45081264 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2045 1 585 NAC Transcription Factor Family AT1G65910 46.801 3.58e-161 475
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso2g2045 NAM 3.6e-40 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2045 - - gmx:100792628 1312.75
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1773 14 50036020 50041229 Gso2g2045 2 45076161 45081264 GST