Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2039 ATGACATTCAAGCGCAGGAATGGAGGTCGCAACAAACACGGCCGCGGCCACGTCAAATTCATCCGGTGCTCCAACTGTGGCAAATGCTGTCCCAAGGACAAGGCCATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAAGCTTGTGTCTATGAACAATATACTCTTCCGAAACTCTATGTGAAGATGCAGTACTGTGTTTCTTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGACAGGAGGAAACGTGAGCCTCCACAGAGATTCATCAGGCGCAGGGATGATGCACCTAGGCCTGGTCAGCCCGGCGGCCAAGGACCTCGTCCTGCTGGCACAGCAGCACCTGTCCGAACCTAA 393 0.5318 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDAPRPGQPGGQGPRPAGTAAPVRT* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2039 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Gso2g2039 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 - -
Gso2g2039 130 MobiDBLite consensus disorder prediction 86 130 - -
Gso2g2039 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gso2g2039 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gso2g2039 130 MobiDBLite consensus disorder prediction 90 110 - -
Gso2g2039 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2039 Gso-Chr2 45014164 45016257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2039 1 115 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.348 6.73e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2039 K02976 - gmx:100499862 223.402