Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2016 ATGGCAGAGGTTACTTTGAATTCAAGTGTCAATATCTTATACCATACAACCAAAAAAATATCCATGAAGTTCTACTCCTCCCAAGTGCATCGTTTCCTTTTCATCATTGTTATTCTTTTCCCCCTGGCTATTGCTGACTTAAGTTCTGACAAGCAAGCCCTTCTGGATTTTGCTGCTGCTGTCCCCCATCGCCGTAACCTTAAGTGGAATCCAGCTACCCCAATCTGTTCATCTTGGGTAGGCATCACTTGCAATCCAAATGGCACTCGTGTTGTTTCTGTCCGGCTCCCTGGAATTGGACTAGTTGGCACCATCCCTGCCAATACACTTGGCAAGATTGACTCACTCAGAAATATCAGCCTCCGAGCCAACTTACTCAGTGGAAGTCTTCCTCCTGATATTACGTCTCTTCCTTCTCTACAATATCTCTACCTTCAGCATAATAACCTTTCTGGTAGCGTACCTACCTCGTTGTCCACCCGCCTCAATGTACTTGATTTGTCATACAATTCCTTCAGTGGTGCTATTCCAAAGACATTACAAAACATAACACAACTAATTAAGTTGAACCTCCAGAACAACTCCCTATCTGGACAGATACCAAATCTCAATGTCACTAAGCTCAGGCACTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTGATGCTCTTCAGATTTTCCCGAATTCTTCCTTTGAGGGTAACTCTCTATGTGGATTACCTCTAAAGTCATGCTCTGTAGTCTCCTCTACACCTCCATCAACTCCTGTCTCACCATCCACTCCTGCAAGACACAGCTCCAAAAGTAAACTGAGTAAGGCAGCTATCATTGCAATTGCAGTTGGTGGGGGTGTGCTATTGCTTTTAGTAGCTCTCATCATTGTTCTTTGCTGTTTAAAGAAAAAAGATGATAGAAGCCCCAGCGTAACTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCGAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGACCTTGAGGATTTGCTGAGAGCTTCAGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCGTATAAGGCTATATTGGAGGAGTCAACAACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTAGGCAAAAGGGAATTTGAACAGCAGATGGAAATTGTGGGAAGGGTTGGACATCACCCAAATGTTGTGCCCCTTCGTGCTTATTATTATTCTAAGGACGAGAAGCTCTTGGTTTATGACTACATCCCAAGTGGCAATCTATCTACCCTCTTGCATGGTAACAGGGCAAGTGGAAGGACTCCATTAGATTGGAATTCCCGAATAAAAATCTCTGTTGGAATTGCCAGAGGAATTGCTCACATACATTCTGTTGGCGGTCCAAAATTCACGCACGGAAATGTCAAATCCTCGAATGTCCTCCTCAACCATGATAATGATGGCTGCATTTCTGATTTTGGCCTGACCCCGCTTATGAATGTTCCTGCAACCCCTTCTAGAGCCGCAGGTTATCGCGCTCCTGAGGTGATTGAAACCCGAAAGCACACCCATAAATCAGATGTGTACAGTTTCGGAATCCTCCTTCTAGAAATGCTTACTGGGAAGGCACCACAACAGTCTCCAGGACGCGATGACATGGTTGATCTCCCAAGGTGGGTCCAGTCTGTTGTTAGGGAAGAGTGGACGGCTGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAGGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGGTTCCAGATATGAGGCCTAGCATGGATGAAGTAGTGAGAATGATTGAAGAGATCCGGCTATCTGACTCAGAAAACCGGCCATCTTCAGAAGAGAATAGATCCAAGGAGGAATCAGCTGCTCAAACTCCATAA 1965 0.4453 MAEVTLNSSVNILYHTTKKISMKFYSSQVHRFLFIIVILFPLAIADLSSDKQALLDFAAAVPHRRNLKWNPATPICSSWVGITCNPNGTRVVSVRLPGIGLVGTIPANTLGKIDSLRNISLRANLLSGSLPPDITSLPSLQYLYLQHNNLSGSVPTSLSTRLNVLDLSYNSFSGAIPKTLQNITQLIKLNLQNNSLSGQIPNLNVTKLRHLNLSYNHLNGSIPDALQIFPNSSFEGNSLCGLPLKSCSVVSSTPPSTPVSPSTPARHSSKSKLSKAAIIAIAVGGGVLLLLVALIIVLCCLKKKDDRSPSVTKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGRVGHHPNVVPLRAYYYSKDEKLLVYDYIPSGNLSTLLHGNRASGRTPLDWNSRIKISVGIARGIAHIHSVGGPKFTHGNVKSSNVLLNHDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHTHKSDVYSFGILLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMDEVVRMIEEIRLSDSENRPSSEENRSKEESAAQTP* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2016 654 SUPERFAMILY L domain-like 60 232 - -
Gso2g2016 654 MobiDBLite consensus disorder prediction 319 334 - -
Gso2g2016 654 Gene3D Transferase(Phosphotransferase) domain 1 434 652 - -
Gso2g2016 654 MobiDBLite consensus disorder prediction 306 334 - -
Gso2g2016 654 Pfam Protein kinase domain 361 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2016 654 ProSitePatterns Protein kinases ATP-binding region signature. 364 395 IPR017441 GO:0005524
Gso2g2016 654 SUPERFAMILY Protein kinase-like (PK-like) 362 636 IPR011009 -
Gso2g2016 654 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Gso2g2016 654 Gene3D Ribonuclease Inhibitor 161 249 IPR032675 -
Gso2g2016 654 MobiDBLite consensus disorder prediction 629 654 - -
Gso2g2016 654 CDD STKc_IRAK 364 629 - -
Gso2g2016 654 Pfam Leucine Rich Repeat 207 227 IPR001611 GO:0005515
Gso2g2016 654 Gene3D Phosphorylase Kinase; domain 1 326 433 - -
Gso2g2016 654 MobiDBLite consensus disorder prediction 629 648 - -
Gso2g2016 654 ProSiteProfiles Protein kinase domain profile. 358 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2016 654 PANTHER OS05G0588300 PROTEIN 15 654 - -
Gso2g2016 654 Gene3D Ribonuclease Inhibitor 49 160 IPR032675 -
Gso2g2016 654 PANTHER LRR RECEPTOR-LIKE KINASE 15 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2016 Gso-Chr2 44661826 44667726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2016 17 652 Receptor kinase-like Gene Family AT5G58300 68.634 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso2g2016 Pkinase 9.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2016 - - gmx:100818344 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1737 14 49603555 49609225 Gso2g2016 2 44661826 44667726 GST
Gso18g0453 18 4484570 4489301 Gso2g2016 2 44661826 44667726 PCT
Gso2g2016 2 44661826 44667726 Gso18g0453 18 4484570 4489301 PCT