Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2013 ATGGCCGACGAAACACCAAATGAGATGAAGGAGGAGGTTCCAGAAATTGTTCCTTTTGATCCTACCAAGAAGAAGAAGAAGAAGAAGATTACAATTGTAGATCCTGCTGATGACCCTGTGGAGAAATTGGCTGAGAAGACAGAAAACCTCTCAGTTTCTGAGGGGGTTGAGACTGCATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAATGAGTAACTTGAATGATGAGAGTGGAGATGCAAATGAAGATTTGGATGATCACCCTGAAGATGATGAAGGAGAAGTGGTTGCTCCTGAGGCTCGCTATCCTTGGGAAGGGAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTAGCTGGAGATCGGCGAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTGTTTGTCAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTTTTGCTTGCTGAATTGGGTACAAGTGGCTCCCTTGATGGACAGCAGAGATTGGTTGTAAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATACGTTATTTGCCTTGGGTGCAAGAGTCCGGATACTATACTTACAAAGGAGAATCGTCTCTTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAACACAGGGACATAG 807 0.4449 MADETPNEMKEEVPEIVPFDPTKKKKKKKITIVDPADDPVEKLAEKTENLSVSEGVETAFAGLKKKKKKPVEMSNLNDESGDANEDLDDHPEDDEGEVVAPEARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2013 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Gso2g2013 268 MobiDBLite consensus disorder prediction 1 30 - -
Gso2g2013 268 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Gso2g2013 268 MobiDBLite consensus disorder prediction 61 75 - -
Gso2g2013 268 Gene3D - 111 253 - -
Gso2g2013 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
Gso2g2013 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Gso2g2013 268 MobiDBLite consensus disorder prediction 61 98 - -
Gso2g2013 268 MobiDBLite consensus disorder prediction 1 22 - -
Gso2g2013 268 MobiDBLite consensus disorder prediction 79 96 - -
Gso2g2013 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Gso2g2013 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2013 Gso-Chr2 44616271 44620217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2013 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 75.646 6.00e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2013 K03238 - gmx:100783618 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1734 14 49569409 49573992 Gso2g2013 2 44616271 44620217 GST