LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso2g2011	ATGGATCTCCTCCTTCTGGAAAAGACCCTCATAGGTCTCTTCCTCGCTGCGGTGGTCGCCATCGCCGTCTCCACCCTCCGCGGCCGGAAATTCAAGCTCCCACCGGGCCCACTCCCCGTCCCAATCTTCGGCAACTGGCTCCAAGTCGGCGACGACCTCAACCACCGCAACCTCACCGATTTGGCCAAAAAATTCGGTGACATCTTCCTCCTCCGCATGGGGCAGCGCAACCTCGTCGTGGTTTCTTCCCCTGAGCTCGCCAAAGAGGTTCTCCACACGCAGGGCGTGGAGTTCGGCTCCCGCACCCGCAACGTCGTCTTCGACATCTTCACCGGAAAGGGCCAAGACATGGTCTTCACCGTCTACGGCGAGCACTGGCGCAAAATGCGCCGCATCATGACCGTCCCCTTCTTCACCAACAAGGTTGTGCAACAATACCGCCATGGATGGGAATCGGAGGCTGCCGCCGTCGTCGAGGACGTCAAGAAAAACCCCGACGCCGCCGTCTCCGGCACCGTCATCCGCCGCCGCCTTCAGCTCATGATGTACAACAACATGTACCGCATAATGTTCGACCGGAGGTTCGAGAGCGAGGAGGATCCCATCTTCCAGAGGCTAAGAGCCTTGAACGGAGAGAGGAGTCGCTTGGCGCAGAGCTTTGAGTATAACTATGGTGATTTTATTCCCATCTTGAGACCCTTCTTGAAGGGTTACTTGAAGATTTGCAAGGAGGTGAAGGAGACGAGGTTGAAGCTTTTCAAGGATTACTTCGTTGACGAGAGGAAGAAGCTTGGAAGCACCAAGAGCACCAACAACAATAATGAACTTAAATGCGCTATTGACCACATTTTGGATGCCCAGAGAAAAGGCGAGATCAACGAAGACAACGTCCTCTACATTGTTGAAAACATCAACGTTGCTGCAATTGAAACAACTCTATGGTCGATTGAGTGGGGCATTGCTGAGCTTGTGAACCACCCAGAGATCCAGCAAAAGTTAAGGGATGAGATTGACAGAGTTCTTGGAGCAGGGCACCAAGTGACTGAGCCAGACATCCAAAAGCTCCCATACCTCCAAGCAGTGGTCAAGGAAACTCTTCGTCTTAGAATGGCAATCCCTCTCCTTGTACCACACATGAACCTCCACGACGCAAAGCTTGGGGGCTATGATATCCCAGCTGAGAGCAAGATCTTGGTGAATGCATGGTGGCTGGCCAACAACCCTGCACACTGGAAGAAGCCAGAGGAGTTCCGGCCTGAGAGGTTCTTCGAGGAGGAGTCGCTTGTTGAAGCCAATGGCAATGACTTTAGGTACCTTCCCTTTGGTGTTGGCAGAAGAAGCTGCCCTGGAATCATTCTTGCATTGCCAATTCTTGGCATCACTTTGGGACGTTTGGTCCAAAACTTTGAGCTCTTGCCTCCCCCTGGCCAGTCACAGATTGACACTAGTGAGAAAGGAGGGCAATTTAGCTTGCACATACTCAAGCATTCCACCATTGTGGCAAAGCCAAGGTCATTTTAG	1521	0.5279	MDLLLLEKTLIGLFLAAVVAIAVSTLRGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF*	507

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso2g2011	506	PANTHER	TRANS-CINNAMATE 4-MONOOXYGENASE	1	506	-	-
	Gso2g2011	506	SUPERFAMILY	Cytochrome P450	34	504	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	62	81	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	86	107	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	181	199	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	296	313	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	316	342	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	359	377	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	400	424	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso2g2011	506	PRINTS	E-class P450 group I signature	438	448	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso2g2011	Gso-Chr2	44577546	44581792	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso2g2011	1	505	Monolignol Biosynthesis Gene Families	AT2G30490	84.554	0.0	875

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso2g2011	K00487		-	gmx:100499623	1003.82

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