Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2007 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCAAATCCCAATCCTCACAACGCCAATGCCGCATCCCAGTTACCGCGTCCGCCGCAGGCCACGGCGTCCACCGCCGTCGCCGGCGCCTTCTCGTCCTCTCTATTCGCGCGCTCCGGCGGACCTCACCACCGGCGAGCCCACTCGGAGATGAGTTTCCGGCTGCCGGACGATATGATGGACCTCTCGCCGTCGGATCCGTTCGCCGGCGGGTCATCGACGGCGAGCATGGAGGAGATCGGATCGGAGGACGACCTGTTCTCGACGTACATTGACGTGGACAAGCTCAGCGGCGCGAACGGGTCGGGCGGTGCCGGAAACGGAGCGGATCCGACCGGCGAACGCGAGAAGAGTCCGGCGAGGCCGCGTCACCGGCAAAGTAGCTCCGTCGATTTCGGGGAAATCATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGATCAAAGGAGAGAAAAGCGCGCTATATACAAGAACTTGAGCGCAAGGTTCAGACTCTTCAGACGGAAGCCACAACTCTTTCTGCCCAATTGACATTATACCAGAGGGACACATCTGGCCTTAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACAGCTTCGCGATGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGACTTAAGGTTGCTACCGGTGAGGGGATGAGCCACACTGAATCCTTTAATCTGGGAATGCACCAGATGCCATTTTCCGGATCAAATTTCATTCCAATCCCGCCACAATCAGGTCCTTCTGGTCACCAGAACATGCAGATGCCACCATTTGGTCACTCCCCATCCACAATGCCAACTCATCAACTGCATCAAACAAGTTCTCATCCATATTCAGAAATATTGCAAAATGAACAGCTTGGTCGTTTCCAAGGGCTTGACATTAGTAGCAAAGGATCAACTCTCGTGAAGTCTGAAGGCCCCTCGCTCTCTGCAAGTGAGAGTAGCAGTACATTTTGA 1095 0.5315 MQDPSSNPNSNPNPNPHNANAASQLPRPPQATASTAVAGAFSSSLFARSGGPHHRRAHSEMSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLSGANGSGGAGNGADPTGEREKSPARPRHRQSSSVDFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEGMSHTESFNLGMHQMPFSGSNFIPIPPQSGPSGHQNMQMPPFGHSPSTMPTHQLHQTSSHPYSEILQNEQLGRFQGLDISSKGSTLVKSEGPSLSASESSSTF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2007 364 MobiDBLite consensus disorder prediction 344 364 - -
Gso2g2007 364 MobiDBLite consensus disorder prediction 1 42 - -
Gso2g2007 364 MobiDBLite consensus disorder prediction 124 140 - -
Gso2g2007 364 Coils Coil 182 209 - -
Gso2g2007 364 MobiDBLite consensus disorder prediction 1 144 - -
Gso2g2007 364 Pfam bZIP transcription factor 166 224 IPR004827 GO:0003700|GO:0006355
Gso2g2007 364 PANTHER ATBZIP TRANSCRIPTION FACTOR 6 361 - -
Gso2g2007 364 Coils Coil 230 261 - -
Gso2g2007 364 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Gso2g2007 364 MobiDBLite consensus disorder prediction 267 330 - -
Gso2g2007 364 CDD bZIP_plant_RF2 167 216 IPR044759 GO:0003700|GO:0006355
Gso2g2007 364 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Gso2g2007 364 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 361 - -
Gso2g2007 364 Gene3D - 165 218 - -
Gso2g2007 364 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 227 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2007 Gso-Chr2 44528458 44531400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2007 1 364 bZIP Transcription Factor Family AT2G40620 50.119 1.58e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso2g2007 bZIP_1 3.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2007 - - gmx:100815680 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1722 14 49372764 49375891 Gso2g2007 2 44528458 44531400 GST
Gso18g0465 18 4609535 4612865 Gso2g2007 2 44528458 44531400 PCT
Gso2g2007 2 44528458 44531400 Gso18g0465 18 4609535 4612865 PCT